Hb_039022_020

Information

Type -
Description -
Location Contig39022: 6002-7288
Sequence    

Annotation

kegg
ID fve:101296821
description putative receptor-like protein kinase At3g47110-like
nr
ID XP_012071181.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067L383
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00717 PE=4 SV=1
Gene Ontology
ID GO:0005515
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039022_020 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
2 Hb_011472_020 0.0848384174 - - PREDICTED: mucin-17-like [Jatropha curcas]
3 Hb_000096_210 0.0850093282 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
4 Hb_005542_040 0.0956043118 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
5 Hb_001318_120 0.0957015892 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
6 Hb_166009_010 0.0958700316 - - carbonyl reductase, putative [Ricinus communis]
7 Hb_000840_050 0.0963756962 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
8 Hb_083412_010 0.1039011877 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
9 Hb_000203_080 0.1065710217 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
10 Hb_008899_030 0.1081555704 - - Lipase class 3-related protein, putative [Theobroma cacao]
11 Hb_005276_220 0.1091388736 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
12 Hb_000108_090 0.1182800176 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
13 Hb_006788_100 0.1193360569 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
14 Hb_187991_010 0.122020289 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
15 Hb_175758_010 0.1231434869 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
16 Hb_001349_020 0.1233115847 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
17 Hb_009554_030 0.1236256164 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
18 Hb_010519_020 0.1265916347 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
19 Hb_000946_050 0.1295615245 - - cytochrome P450, putative [Ricinus communis]
20 Hb_004122_060 0.1305582783 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]

Gene co-expression network

sample Hb_039022_020 Hb_039022_020 Hb_011472_020 Hb_011472_020 Hb_039022_020--Hb_011472_020 Hb_000096_210 Hb_000096_210 Hb_039022_020--Hb_000096_210 Hb_005542_040 Hb_005542_040 Hb_039022_020--Hb_005542_040 Hb_001318_120 Hb_001318_120 Hb_039022_020--Hb_001318_120 Hb_166009_010 Hb_166009_010 Hb_039022_020--Hb_166009_010 Hb_000840_050 Hb_000840_050 Hb_039022_020--Hb_000840_050 Hb_005276_220 Hb_005276_220 Hb_011472_020--Hb_005276_220 Hb_010519_020 Hb_010519_020 Hb_011472_020--Hb_010519_020 Hb_011472_020--Hb_001318_120 Hb_001421_010 Hb_001421_010 Hb_011472_020--Hb_001421_010 Hb_000403_110 Hb_000403_110 Hb_011472_020--Hb_000403_110 Hb_000946_050 Hb_000946_050 Hb_000096_210--Hb_000946_050 Hb_009554_030 Hb_009554_030 Hb_000096_210--Hb_009554_030 Hb_014250_010 Hb_014250_010 Hb_000096_210--Hb_014250_010 Hb_004122_060 Hb_004122_060 Hb_000096_210--Hb_004122_060 Hb_005766_010 Hb_005766_010 Hb_000096_210--Hb_005766_010 Hb_107809_010 Hb_107809_010 Hb_005542_040--Hb_107809_010 Hb_007676_040 Hb_007676_040 Hb_005542_040--Hb_007676_040 Hb_005542_040--Hb_005276_220 Hb_005542_040--Hb_001318_120 Hb_000108_090 Hb_000108_090 Hb_005542_040--Hb_000108_090 Hb_005542_040--Hb_011472_020 Hb_001318_120--Hb_010519_020 Hb_175758_010 Hb_175758_010 Hb_001318_120--Hb_175758_010 Hb_001318_120--Hb_005276_220 Hb_001329_110 Hb_001329_110 Hb_001318_120--Hb_001329_110 Hb_001318_120--Hb_000403_110 Hb_000009_130 Hb_000009_130 Hb_166009_010--Hb_000009_130 Hb_004129_110 Hb_004129_110 Hb_166009_010--Hb_004129_110 Hb_166009_010--Hb_011472_020 Hb_003376_300 Hb_003376_300 Hb_166009_010--Hb_003376_300 Hb_000022_280 Hb_000022_280 Hb_166009_010--Hb_000022_280 Hb_138606_020 Hb_138606_020 Hb_000840_050--Hb_138606_020 Hb_000840_050--Hb_175758_010 Hb_000203_080 Hb_000203_080 Hb_000840_050--Hb_000203_080 Hb_000840_050--Hb_001329_110 Hb_009659_040 Hb_009659_040 Hb_000840_050--Hb_009659_040 Hb_010417_100 Hb_010417_100 Hb_000840_050--Hb_010417_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.684676 0.828932 0.57492 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.23372 0.427034

CAGE analysis