Hb_010417_100

Information

Type -
Description -
Location Contig10417: 71173-79149
Sequence    

Annotation

kegg
ID pop:POPTR_0003s13310g
description NADPH oxidase family protein
nr
ID XP_012086808.1
description PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]
swissprot
ID Q948U0
description Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1
trembl
ID A0A067JN07
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20527 PE=4 SV=1
Gene Ontology
ID GO:0016021
description respiratory burst oxidase homolog protein a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010417_100 0.0 - - PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]
2 Hb_005357_020 0.079953713 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007894_030 0.0830583508 - - calcium-dependent protein kinase, putative [Ricinus communis]
4 Hb_001636_010 0.0832112782 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
5 Hb_000840_050 0.0953196019 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
6 Hb_000085_220 0.099390189 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000497_100 0.1023702445 - - respiratory burst oxidase D [Manihot esculenta]
8 Hb_001421_010 0.103214857 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
9 Hb_020285_010 0.1036679755 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3, partial [Pyrus x bretschneideri]
10 Hb_006634_090 0.1044563483 - - PREDICTED: uncharacterized protein LOC105646581 [Jatropha curcas]
11 Hb_038777_010 0.1054473043 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN2 isoform X1 [Populus euphratica]
12 Hb_001369_070 0.1079386685 - - unnamed protein product [Vitis vinifera]
13 Hb_006788_100 0.1085677193 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
14 Hb_175758_010 0.1143671598 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
15 Hb_138606_020 0.1147668698 - - Nitrate transporter2.5 [Theobroma cacao]
16 Hb_000403_110 0.1227477098 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
17 Hb_008899_030 0.1241595141 - - Lipase class 3-related protein, putative [Theobroma cacao]
18 Hb_012743_020 0.1244275238 - - serine/threonine protein phosphatase, putative [Ricinus communis]
19 Hb_029260_010 0.1265091382 - - nitrate transporter, putative [Ricinus communis]
20 Hb_007420_020 0.1265942757 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]

Gene co-expression network

sample Hb_010417_100 Hb_010417_100 Hb_005357_020 Hb_005357_020 Hb_010417_100--Hb_005357_020 Hb_007894_030 Hb_007894_030 Hb_010417_100--Hb_007894_030 Hb_001636_010 Hb_001636_010 Hb_010417_100--Hb_001636_010 Hb_000840_050 Hb_000840_050 Hb_010417_100--Hb_000840_050 Hb_000085_220 Hb_000085_220 Hb_010417_100--Hb_000085_220 Hb_000497_100 Hb_000497_100 Hb_010417_100--Hb_000497_100 Hb_012743_020 Hb_012743_020 Hb_005357_020--Hb_012743_020 Hb_038777_010 Hb_038777_010 Hb_005357_020--Hb_038777_010 Hb_000589_240 Hb_000589_240 Hb_005357_020--Hb_000589_240 Hb_138606_020 Hb_138606_020 Hb_005357_020--Hb_138606_020 Hb_029260_010 Hb_029260_010 Hb_005357_020--Hb_029260_010 Hb_001369_070 Hb_001369_070 Hb_007894_030--Hb_001369_070 Hb_020285_010 Hb_020285_010 Hb_007894_030--Hb_020285_010 Hb_007894_030--Hb_000497_100 Hb_007894_030--Hb_038777_010 Hb_007894_030--Hb_001636_010 Hb_001636_010--Hb_020285_010 Hb_001421_010 Hb_001421_010 Hb_001636_010--Hb_001421_010 Hb_001636_010--Hb_038777_010 Hb_001894_040 Hb_001894_040 Hb_001636_010--Hb_001894_040 Hb_000840_050--Hb_138606_020 Hb_175758_010 Hb_175758_010 Hb_000840_050--Hb_175758_010 Hb_000203_080 Hb_000203_080 Hb_000840_050--Hb_000203_080 Hb_001329_110 Hb_001329_110 Hb_000840_050--Hb_001329_110 Hb_009659_040 Hb_009659_040 Hb_000840_050--Hb_009659_040 Hb_004166_020 Hb_004166_020 Hb_000085_220--Hb_004166_020 Hb_014361_020 Hb_014361_020 Hb_000085_220--Hb_014361_020 Hb_000092_030 Hb_000092_030 Hb_000085_220--Hb_000092_030 Hb_167272_010 Hb_167272_010 Hb_000085_220--Hb_167272_010 Hb_031862_020 Hb_031862_020 Hb_000085_220--Hb_031862_020 Hb_006269_010 Hb_006269_010 Hb_000085_220--Hb_006269_010 Hb_000497_100--Hb_020285_010 Hb_000497_100--Hb_001369_070 Hb_000028_460 Hb_000028_460 Hb_000497_100--Hb_000028_460 Hb_000497_100--Hb_038777_010 Hb_131662_010 Hb_131662_010 Hb_000497_100--Hb_131662_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0113471 9.21987 5.05726 6.49461 0.00474827 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0229951 0.262396 0.0173651 9.9366 4.26235

CAGE analysis