Hb_175758_010

Information

Type -
Description -
Location Contig175758: 40-401
Sequence    

Annotation

kegg
ID tcc:TCM_002083
description Aspartic protease isoform 2
nr
ID XP_012087602.1
description PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
swissprot
ID O04057
description Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1
trembl
ID A0A067JPW6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24447 PE=3 SV=1
Gene Ontology
ID GO:0004190
description aspartic proteinase a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16831: 163-354
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_175758_010 0.0 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
2 Hb_001421_010 0.0528134672 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
3 Hb_001329_110 0.0602989902 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
4 Hb_010519_020 0.0649726801 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
5 Hb_000011_120 0.074233643 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
6 Hb_001318_120 0.0757748559 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
7 Hb_000840_050 0.08084866 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
8 Hb_000403_110 0.0808594559 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
9 Hb_005276_220 0.0852632725 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
10 Hb_011472_020 0.09098758 - - PREDICTED: mucin-17-like [Jatropha curcas]
11 Hb_008783_020 0.0922212083 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
12 Hb_007123_020 0.0985522553 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
13 Hb_000203_080 0.104218652 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
14 Hb_009659_040 0.1079235809 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER [Populus euphratica]
15 Hb_006711_020 0.1098282493 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
16 Hb_000236_050 0.1134993309 - - phosphate transporter [Manihot esculenta]
17 Hb_010417_100 0.1143671598 - - PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]
18 Hb_000317_220 0.1158533414 - - conserved hypothetical protein [Ricinus communis]
19 Hb_009785_010 0.1172169653 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
20 Hb_138606_020 0.1177241162 - - Nitrate transporter2.5 [Theobroma cacao]

Gene co-expression network

sample Hb_175758_010 Hb_175758_010 Hb_001421_010 Hb_001421_010 Hb_175758_010--Hb_001421_010 Hb_001329_110 Hb_001329_110 Hb_175758_010--Hb_001329_110 Hb_010519_020 Hb_010519_020 Hb_175758_010--Hb_010519_020 Hb_000011_120 Hb_000011_120 Hb_175758_010--Hb_000011_120 Hb_001318_120 Hb_001318_120 Hb_175758_010--Hb_001318_120 Hb_000840_050 Hb_000840_050 Hb_175758_010--Hb_000840_050 Hb_001421_010--Hb_010519_020 Hb_000403_110 Hb_000403_110 Hb_001421_010--Hb_000403_110 Hb_011472_020 Hb_011472_020 Hb_001421_010--Hb_011472_020 Hb_001421_010--Hb_001329_110 Hb_008783_020 Hb_008783_020 Hb_001421_010--Hb_008783_020 Hb_001329_110--Hb_000011_120 Hb_001329_110--Hb_001318_120 Hb_001329_110--Hb_000840_050 Hb_001329_110--Hb_010519_020 Hb_010519_020--Hb_001318_120 Hb_010519_020--Hb_011472_020 Hb_006711_020 Hb_006711_020 Hb_010519_020--Hb_006711_020 Hb_010519_020--Hb_000403_110 Hb_009627_040 Hb_009627_040 Hb_000011_120--Hb_009627_040 Hb_005211_090 Hb_005211_090 Hb_000011_120--Hb_005211_090 Hb_010839_010 Hb_010839_010 Hb_000011_120--Hb_010839_010 Hb_000011_120--Hb_001318_120 Hb_001318_120--Hb_011472_020 Hb_005276_220 Hb_005276_220 Hb_001318_120--Hb_005276_220 Hb_001318_120--Hb_000403_110 Hb_138606_020 Hb_138606_020 Hb_000840_050--Hb_138606_020 Hb_000203_080 Hb_000203_080 Hb_000840_050--Hb_000203_080 Hb_009659_040 Hb_009659_040 Hb_000840_050--Hb_009659_040 Hb_010417_100 Hb_010417_100 Hb_000840_050--Hb_010417_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.525345 140.855 81.1022 104.831 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.88003 0.347207 0.477096 263.676 77.4074

CAGE analysis