Hb_010519_020

Information

Type -
Description -
Location Contig10519: 50695-51222
Sequence    

Annotation

kegg
ID pop:POPTR_0008s10220g
description POPTRDRAFT_721057; invertase/pectin methylesterase inhibitor family protein
nr
ID KDP27948.1
description hypothetical protein JCGZ_19028 [Jatropha curcas]
swissprot
ID F4HWQ8
description Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis thaliana GN=C/VIF1 PE=1 SV=1
trembl
ID A0A067JYR9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19028 PE=4 SV=1
Gene Ontology
ID GO:0004857
description cell wall and vascular inhibitor of beta-fructosidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010519_020 0.0 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
2 Hb_001318_120 0.0597183409 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
3 Hb_175758_010 0.0649726801 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
4 Hb_001421_010 0.0665113027 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
5 Hb_011472_020 0.0728464434 - - PREDICTED: mucin-17-like [Jatropha curcas]
6 Hb_006711_020 0.0773524046 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
7 Hb_000403_110 0.0807213665 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
8 Hb_005276_220 0.0856224415 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
9 Hb_001329_110 0.0857812792 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
10 Hb_000011_120 0.0937352352 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
11 Hb_008783_020 0.1053645296 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
12 Hb_009627_040 0.1101677986 - - Lipase class 3-related protein, putative [Theobroma cacao]
13 Hb_000009_130 0.1127269047 - - hypothetical protein POPTR_0007s12410g [Populus trichocarpa]
14 Hb_009785_010 0.1142731724 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
15 Hb_005211_090 0.1152079599 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
16 Hb_005237_040 0.1158897391 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
17 Hb_007123_020 0.1183912217 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
18 Hb_010174_170 0.1193677074 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Jatropha curcas]
19 Hb_005542_040 0.1194115852 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
20 Hb_010926_010 0.1194117135 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]

Gene co-expression network

sample Hb_010519_020 Hb_010519_020 Hb_001318_120 Hb_001318_120 Hb_010519_020--Hb_001318_120 Hb_175758_010 Hb_175758_010 Hb_010519_020--Hb_175758_010 Hb_001421_010 Hb_001421_010 Hb_010519_020--Hb_001421_010 Hb_011472_020 Hb_011472_020 Hb_010519_020--Hb_011472_020 Hb_006711_020 Hb_006711_020 Hb_010519_020--Hb_006711_020 Hb_000403_110 Hb_000403_110 Hb_010519_020--Hb_000403_110 Hb_001318_120--Hb_011472_020 Hb_001318_120--Hb_175758_010 Hb_005276_220 Hb_005276_220 Hb_001318_120--Hb_005276_220 Hb_001329_110 Hb_001329_110 Hb_001318_120--Hb_001329_110 Hb_001318_120--Hb_000403_110 Hb_175758_010--Hb_001421_010 Hb_175758_010--Hb_001329_110 Hb_000011_120 Hb_000011_120 Hb_175758_010--Hb_000011_120 Hb_000840_050 Hb_000840_050 Hb_175758_010--Hb_000840_050 Hb_001421_010--Hb_000403_110 Hb_001421_010--Hb_011472_020 Hb_001421_010--Hb_001329_110 Hb_008783_020 Hb_008783_020 Hb_001421_010--Hb_008783_020 Hb_011472_020--Hb_005276_220 Hb_011472_020--Hb_000403_110 Hb_039022_020 Hb_039022_020 Hb_011472_020--Hb_039022_020 Hb_005237_040 Hb_005237_040 Hb_006711_020--Hb_005237_040 Hb_009785_010 Hb_009785_010 Hb_006711_020--Hb_009785_010 Hb_002391_350 Hb_002391_350 Hb_006711_020--Hb_002391_350 Hb_002686_390 Hb_002686_390 Hb_006711_020--Hb_002686_390 Hb_004884_200 Hb_004884_200 Hb_006711_020--Hb_004884_200 Hb_000403_110--Hb_008783_020 Hb_000403_110--Hb_005276_220 Hb_000403_110--Hb_175758_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.53199 112.502 76.9652 75.4698 0.710654 0.471377
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.122901 0.0965631 0.826701 239.839 50.5855

CAGE analysis