Hb_002686_390

Information

Type -
Description -
Location Contig2686: 308372-309888
Sequence    

Annotation

kegg
ID rcu:RCOM_1122760
description hypothetical protein
nr
ID XP_012089407.1
description PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JIK6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23609 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28047: 308637-309082 , PASA_asmbl_28048: 309120-309993 , PASA_asmbl_28049: 309322-309687
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002686_390 0.0 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
2 Hb_000010_200 0.0862948926 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
3 Hb_000254_040 0.0900536212 - - PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
4 Hb_006711_020 0.0924924336 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
5 Hb_006949_030 0.1002673648 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
6 Hb_004884_200 0.1002895306 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
7 Hb_001514_210 0.1019177957 - - hypothetical protein VITISV_012133 [Vitis vinifera]
8 Hb_009785_010 0.1087847997 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
9 Hb_005237_040 0.1103010939 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
10 Hb_001331_040 0.1200198473 - - PREDICTED: cationic peroxidase 1-like [Jatropha curcas]
11 Hb_000381_030 0.1264248685 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
12 Hb_002391_350 0.1265810899 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
13 Hb_001621_020 0.1297614426 - - -
14 Hb_000085_230 0.1298948497 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
15 Hb_031042_030 0.129923254 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
16 Hb_001266_020 0.130302907 - - PREDICTED: uncharacterized protein LOC105650395 [Jatropha curcas]
17 Hb_004657_040 0.1305540519 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
18 Hb_004079_110 0.1312192953 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
19 Hb_001024_030 0.1322419268 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
20 Hb_014037_010 0.1346491007 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]

Gene co-expression network

sample Hb_002686_390 Hb_002686_390 Hb_000010_200 Hb_000010_200 Hb_002686_390--Hb_000010_200 Hb_000254_040 Hb_000254_040 Hb_002686_390--Hb_000254_040 Hb_006711_020 Hb_006711_020 Hb_002686_390--Hb_006711_020 Hb_006949_030 Hb_006949_030 Hb_002686_390--Hb_006949_030 Hb_004884_200 Hb_004884_200 Hb_002686_390--Hb_004884_200 Hb_001514_210 Hb_001514_210 Hb_002686_390--Hb_001514_210 Hb_000381_030 Hb_000381_030 Hb_000010_200--Hb_000381_030 Hb_001331_040 Hb_001331_040 Hb_000010_200--Hb_001331_040 Hb_000010_200--Hb_004884_200 Hb_000010_200--Hb_006949_030 Hb_007894_260 Hb_007894_260 Hb_000010_200--Hb_007894_260 Hb_000254_040--Hb_006949_030 Hb_000254_040--Hb_001331_040 Hb_000254_040--Hb_000010_200 Hb_001013_040 Hb_001013_040 Hb_000254_040--Hb_001013_040 Hb_000254_040--Hb_000381_030 Hb_010519_020 Hb_010519_020 Hb_006711_020--Hb_010519_020 Hb_005237_040 Hb_005237_040 Hb_006711_020--Hb_005237_040 Hb_009785_010 Hb_009785_010 Hb_006711_020--Hb_009785_010 Hb_002391_350 Hb_002391_350 Hb_006711_020--Hb_002391_350 Hb_006711_020--Hb_004884_200 Hb_006949_030--Hb_001331_040 Hb_006949_030--Hb_000381_030 Hb_006938_010 Hb_006938_010 Hb_006949_030--Hb_006938_010 Hb_001621_020 Hb_001621_020 Hb_006949_030--Hb_001621_020 Hb_004884_200--Hb_009785_010 Hb_004884_200--Hb_002391_350 Hb_004884_200--Hb_005237_040 Hb_014037_010 Hb_014037_010 Hb_004884_200--Hb_014037_010 Hb_009627_040 Hb_009627_040 Hb_004884_200--Hb_009627_040 Hb_012753_200 Hb_012753_200 Hb_001514_210--Hb_012753_200 Hb_000085_230 Hb_000085_230 Hb_001514_210--Hb_000085_230 Hb_000579_180 Hb_000579_180 Hb_001514_210--Hb_000579_180 Hb_002805_150 Hb_002805_150 Hb_001514_210--Hb_002805_150 Hb_003031_030 Hb_003031_030 Hb_001514_210--Hb_003031_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.611863 35.5423 16.8746 11.1934 0.142612 0.219875
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.58963 0.926596 0.318824 76.3282 8.63097

CAGE analysis