Hb_000254_040

Information

Type -
Description -
Location Contig254: 68825-69787
Sequence    

Annotation

kegg
ID rcu:RCOM_1494340
description hypothetical protein
nr
ID XP_012073360.1
description PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06289 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000254_040 0.0 - - PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
2 Hb_002686_390 0.0900536212 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
3 Hb_006949_030 0.1127064776 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
4 Hb_001331_040 0.1157878585 - - PREDICTED: cationic peroxidase 1-like [Jatropha curcas]
5 Hb_000010_200 0.1216234464 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_001013_040 0.121813335 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
7 Hb_000381_030 0.1224067273 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
8 Hb_004079_110 0.1258971663 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
9 Hb_001024_030 0.1300331345 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
10 Hb_005010_040 0.1317096616 - - PREDICTED: uncharacterized protein LOC105630824 [Jatropha curcas]
11 Hb_002542_090 0.1330187924 - - Potassium transporter, putative [Ricinus communis]
12 Hb_031042_030 0.1395184021 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
13 Hb_006711_020 0.1462567736 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
14 Hb_001660_040 0.1485017851 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
15 Hb_004884_200 0.1499822819 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
16 Hb_006938_010 0.1513373104 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
17 Hb_001856_060 0.1521173686 - - serine/threonine protein kinase, putative [Ricinus communis]
18 Hb_007875_070 0.1538903074 - - hypothetical protein JCGZ_05017 [Jatropha curcas]
19 Hb_001621_020 0.1544050317 - - -
20 Hb_012019_020 0.1585126437 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000254_040 Hb_000254_040 Hb_002686_390 Hb_002686_390 Hb_000254_040--Hb_002686_390 Hb_006949_030 Hb_006949_030 Hb_000254_040--Hb_006949_030 Hb_001331_040 Hb_001331_040 Hb_000254_040--Hb_001331_040 Hb_000010_200 Hb_000010_200 Hb_000254_040--Hb_000010_200 Hb_001013_040 Hb_001013_040 Hb_000254_040--Hb_001013_040 Hb_000381_030 Hb_000381_030 Hb_000254_040--Hb_000381_030 Hb_002686_390--Hb_000010_200 Hb_006711_020 Hb_006711_020 Hb_002686_390--Hb_006711_020 Hb_002686_390--Hb_006949_030 Hb_004884_200 Hb_004884_200 Hb_002686_390--Hb_004884_200 Hb_001514_210 Hb_001514_210 Hb_002686_390--Hb_001514_210 Hb_006949_030--Hb_001331_040 Hb_006949_030--Hb_000381_030 Hb_006938_010 Hb_006938_010 Hb_006949_030--Hb_006938_010 Hb_001621_020 Hb_001621_020 Hb_006949_030--Hb_001621_020 Hb_006949_030--Hb_000010_200 Hb_001331_040--Hb_000381_030 Hb_001331_040--Hb_006938_010 Hb_001331_040--Hb_000010_200 Hb_001331_040--Hb_001013_040 Hb_005010_040 Hb_005010_040 Hb_001331_040--Hb_005010_040 Hb_000010_200--Hb_000381_030 Hb_000010_200--Hb_004884_200 Hb_007894_260 Hb_007894_260 Hb_000010_200--Hb_007894_260 Hb_001856_060 Hb_001856_060 Hb_001013_040--Hb_001856_060 Hb_001013_040--Hb_000381_030 Hb_007875_070 Hb_007875_070 Hb_001013_040--Hb_007875_070 Hb_012019_020 Hb_012019_020 Hb_001013_040--Hb_012019_020 Hb_002171_070 Hb_002171_070 Hb_001013_040--Hb_002171_070 Hb_000381_030--Hb_006938_010 Hb_000381_030--Hb_007894_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0463588 1.5687 0.89275 0.351322 0 0.0259424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0835609 0 4.15397 0.426176

CAGE analysis