Hb_001856_060

Information

Type -
Description -
Location Contig1856: 60327-66707
Sequence    

Annotation

kegg
ID rcu:RCOM_0492570
description serine/threonine protein kinase, putative (EC:2.7.11.25)
nr
ID XP_002529319.1
description serine/threonine protein kinase, putative [Ricinus communis]
swissprot
ID O23304
description Serine/threonine-protein kinase BLUS1 OS=Arabidopsis thaliana GN=BLUS1 PE=1 SV=1
trembl
ID B9STK0
description Serine/threonine protein kinase, putative OS=Ricinus communis GN=RCOM_0492570 PE=4 SV=1
Gene Ontology
ID GO:0016020
description serine threonine-protein kinase blus1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18150: 62332-63109
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001856_060 0.0 - - serine/threonine protein kinase, putative [Ricinus communis]
2 Hb_001013_040 0.076400104 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
3 Hb_008080_050 0.0864352765 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_114025_010 0.1102400042 - - hypothetical protein POPTR_0008s13520g [Populus trichocarpa]
5 Hb_002435_080 0.1183899802 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001331_040 0.1185570577 - - PREDICTED: cationic peroxidase 1-like [Jatropha curcas]
7 Hb_000411_060 0.1194464555 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
8 Hb_000381_030 0.1200532223 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
9 Hb_002542_090 0.1231132286 - - Potassium transporter, putative [Ricinus communis]
10 Hb_124385_010 0.1351228738 - - hypothetical protein JCGZ_13882 [Jatropha curcas]
11 Hb_007875_070 0.1409354608 - - hypothetical protein JCGZ_05017 [Jatropha curcas]
12 Hb_006938_010 0.141280543 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
13 Hb_020902_020 0.1488897665 - - hypothetical protein JCGZ_07820 [Jatropha curcas]
14 Hb_008080_040 0.1491797385 - - hypothetical protein EUGRSUZ_D00834 [Eucalyptus grandis]
15 Hb_110218_010 0.1513031554 - - PREDICTED: uncharacterized protein LOC104428128 [Eucalyptus grandis]
16 Hb_000254_040 0.1521173686 - - PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
17 Hb_005010_040 0.1554659697 - - PREDICTED: uncharacterized protein LOC105630824 [Jatropha curcas]
18 Hb_001675_230 0.1560033162 - - scab resistance family protein [Populus trichocarpa]
19 Hb_006949_030 0.1567862434 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
20 Hb_002171_070 0.1599354583 desease resistance Gene Name: NB-ARC NBS-LRR resistance gene-like protein ARGH30 [Populus trichocarpa]

Gene co-expression network

sample Hb_001856_060 Hb_001856_060 Hb_001013_040 Hb_001013_040 Hb_001856_060--Hb_001013_040 Hb_008080_050 Hb_008080_050 Hb_001856_060--Hb_008080_050 Hb_114025_010 Hb_114025_010 Hb_001856_060--Hb_114025_010 Hb_002435_080 Hb_002435_080 Hb_001856_060--Hb_002435_080 Hb_001331_040 Hb_001331_040 Hb_001856_060--Hb_001331_040 Hb_000411_060 Hb_000411_060 Hb_001856_060--Hb_000411_060 Hb_000381_030 Hb_000381_030 Hb_001013_040--Hb_000381_030 Hb_007875_070 Hb_007875_070 Hb_001013_040--Hb_007875_070 Hb_001013_040--Hb_001331_040 Hb_012019_020 Hb_012019_020 Hb_001013_040--Hb_012019_020 Hb_002171_070 Hb_002171_070 Hb_001013_040--Hb_002171_070 Hb_008080_050--Hb_114025_010 Hb_001675_230 Hb_001675_230 Hb_008080_050--Hb_001675_230 Hb_008080_050--Hb_000411_060 Hb_002542_090 Hb_002542_090 Hb_008080_050--Hb_002542_090 Hb_008080_050--Hb_001013_040 Hb_114025_010--Hb_001675_230 Hb_006120_020 Hb_006120_020 Hb_114025_010--Hb_006120_020 Hb_114025_010--Hb_002435_080 Hb_000291_320 Hb_000291_320 Hb_114025_010--Hb_000291_320 Hb_020902_020 Hb_020902_020 Hb_002435_080--Hb_020902_020 Hb_002435_080--Hb_008080_050 Hb_002435_080--Hb_001013_040 Hb_099198_010 Hb_099198_010 Hb_002435_080--Hb_099198_010 Hb_001331_040--Hb_000381_030 Hb_006949_030 Hb_006949_030 Hb_001331_040--Hb_006949_030 Hb_006938_010 Hb_006938_010 Hb_001331_040--Hb_006938_010 Hb_000010_200 Hb_000010_200 Hb_001331_040--Hb_000010_200 Hb_005010_040 Hb_005010_040 Hb_001331_040--Hb_005010_040 Hb_009012_020 Hb_009012_020 Hb_000411_060--Hb_009012_020 Hb_000487_170 Hb_000487_170 Hb_000411_060--Hb_000487_170 Hb_001902_180 Hb_001902_180 Hb_000411_060--Hb_001902_180 Hb_000101_050 Hb_000101_050 Hb_000411_060--Hb_000101_050 Hb_008080_040 Hb_008080_040 Hb_000411_060--Hb_008080_040 Hb_001357_260 Hb_001357_260 Hb_000411_060--Hb_001357_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.7752 1.66184 0.15507 0 0.011333
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0109359 0 12.1248 1.26088

CAGE analysis