Hb_000411_060

Information

Type -
Description -
Location Contig411: 119407-121550
Sequence    

Annotation

kegg
ID pop:POPTR_0014s03700g
description hypothetical protein
nr
ID XP_012071743.1
description PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
swissprot
ID Q9SZ46
description Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CYP82C4 PE=2 SV=1
trembl
ID A0A067L2U3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04354 PE=3 SV=1
Gene Ontology
ID GO:0005488
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40690: 120523-120627 , PASA_asmbl_40691: 120681-120875
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000411_060 0.0 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
2 Hb_009012_020 0.103715681 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
3 Hb_000487_170 0.1051312409 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
4 Hb_001902_180 0.1064143152 - - PREDICTED: uncharacterized protein LOC105129658 [Populus euphratica]
5 Hb_000101_050 0.1065707056 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
6 Hb_008080_040 0.1128239978 - - hypothetical protein EUGRSUZ_D00834 [Eucalyptus grandis]
7 Hb_001357_260 0.1181212543 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
8 Hb_001013_040 0.1181730053 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
9 Hb_004463_040 0.1183275768 - - -
10 Hb_000976_020 0.118429432 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
11 Hb_001856_060 0.1194464555 - - serine/threonine protein kinase, putative [Ricinus communis]
12 Hb_002311_050 0.1219902869 - - PREDICTED: uncharacterized protein LOC105122837 isoform X2 [Populus euphratica]
13 Hb_000118_010 0.1221635491 desease resistance Gene Name: LRR_4 hypothetical protein POPTR_0021s00470g [Populus trichocarpa]
14 Hb_002917_010 0.123098981 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
15 Hb_021419_060 0.1231584884 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
16 Hb_002890_400 0.1272195011 - - 2-nitropropane dioxygenase precursor, putative [Ricinus communis]
17 Hb_110218_010 0.12737957 - - PREDICTED: uncharacterized protein LOC104428128 [Eucalyptus grandis]
18 Hb_007875_070 0.128903684 - - hypothetical protein JCGZ_05017 [Jatropha curcas]
19 Hb_008080_050 0.131982379 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_000327_300 0.1355252647 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]

Gene co-expression network

sample Hb_000411_060 Hb_000411_060 Hb_009012_020 Hb_009012_020 Hb_000411_060--Hb_009012_020 Hb_000487_170 Hb_000487_170 Hb_000411_060--Hb_000487_170 Hb_001902_180 Hb_001902_180 Hb_000411_060--Hb_001902_180 Hb_000101_050 Hb_000101_050 Hb_000411_060--Hb_000101_050 Hb_008080_040 Hb_008080_040 Hb_000411_060--Hb_008080_040 Hb_001357_260 Hb_001357_260 Hb_000411_060--Hb_001357_260 Hb_009012_020--Hb_001902_180 Hb_000046_060 Hb_000046_060 Hb_009012_020--Hb_000046_060 Hb_110218_010 Hb_110218_010 Hb_009012_020--Hb_110218_010 Hb_004463_040 Hb_004463_040 Hb_009012_020--Hb_004463_040 Hb_000684_020 Hb_000684_020 Hb_009012_020--Hb_000684_020 Hb_064398_010 Hb_064398_010 Hb_000487_170--Hb_064398_010 Hb_010712_020 Hb_010712_020 Hb_000487_170--Hb_010712_020 Hb_001141_170 Hb_001141_170 Hb_000487_170--Hb_001141_170 Hb_002311_050 Hb_002311_050 Hb_000487_170--Hb_002311_050 Hb_007342_020 Hb_007342_020 Hb_000487_170--Hb_007342_020 Hb_005993_070 Hb_005993_070 Hb_001902_180--Hb_005993_070 Hb_006446_060 Hb_006446_060 Hb_001902_180--Hb_006446_060 Hb_001902_180--Hb_000101_050 Hb_005731_080 Hb_005731_080 Hb_001902_180--Hb_005731_080 Hb_000101_050--Hb_006446_060 Hb_041769_010 Hb_041769_010 Hb_000101_050--Hb_041769_010 Hb_000101_050--Hb_005993_070 Hb_000101_050--Hb_005731_080 Hb_059162_010 Hb_059162_010 Hb_000101_050--Hb_059162_010 Hb_000327_300 Hb_000327_300 Hb_008080_040--Hb_000327_300 Hb_004586_080 Hb_004586_080 Hb_008080_040--Hb_004586_080 Hb_000407_110 Hb_000407_110 Hb_008080_040--Hb_000407_110 Hb_002965_020 Hb_002965_020 Hb_008080_040--Hb_002965_020 Hb_020902_020 Hb_020902_020 Hb_008080_040--Hb_020902_020 Hb_008080_040--Hb_001357_260 Hb_112082_030 Hb_112082_030 Hb_001357_260--Hb_112082_030 Hb_002917_010 Hb_002917_010 Hb_001357_260--Hb_002917_010 Hb_000976_020 Hb_000976_020 Hb_001357_260--Hb_000976_020 Hb_001357_260--Hb_002965_020 Hb_001357_260--Hb_004586_080 Hb_001357_260--Hb_000327_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.05515 0.450688 0.0864822 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 8.4848 0.390015

CAGE analysis