Hb_064398_010

Information

Type -
Description -
Location Contig64398: 1552-4247
Sequence    

Annotation

kegg
ID rcu:RCOM_1679930
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_002509593.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID P48418
description Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1
trembl
ID B9RBQ9
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1679930 PE=3 SV=1
Gene Ontology
ID GO:0005506
description flavonoid 3 -monooxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52221: 1603-3332
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064398_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_010712_020 0.0704401868 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
3 Hb_001863_290 0.0710005146 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
4 Hb_001442_080 0.0718629323 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
5 Hb_000487_170 0.0798148123 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
6 Hb_001141_170 0.0842709101 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
7 Hb_107258_010 0.0870587584 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
8 Hb_146023_010 0.0880801577 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_007342_020 0.0888337715 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
10 Hb_011824_010 0.0899626624 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
11 Hb_002900_020 0.09454442 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
12 Hb_000483_020 0.0959058879 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
13 Hb_004564_010 0.0997627814 - - receptor-kinase, putative [Ricinus communis]
14 Hb_000859_040 0.1019586188 - - Early nodulin 16 precursor, putative [Ricinus communis]
15 Hb_007810_140 0.1032234325 - - Ankyrin repeat-containing protein [Medicago truncatula]
16 Hb_000160_230 0.1036541481 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
17 Hb_002917_010 0.1045829901 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
18 Hb_001047_250 0.1076364443 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
19 Hb_000537_120 0.1123668374 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
20 Hb_012660_010 0.113735922 - - hypothetical protein JCGZ_25971 [Jatropha curcas]

Gene co-expression network

sample Hb_064398_010 Hb_064398_010 Hb_010712_020 Hb_010712_020 Hb_064398_010--Hb_010712_020 Hb_001863_290 Hb_001863_290 Hb_064398_010--Hb_001863_290 Hb_001442_080 Hb_001442_080 Hb_064398_010--Hb_001442_080 Hb_000487_170 Hb_000487_170 Hb_064398_010--Hb_000487_170 Hb_001141_170 Hb_001141_170 Hb_064398_010--Hb_001141_170 Hb_107258_010 Hb_107258_010 Hb_064398_010--Hb_107258_010 Hb_011824_010 Hb_011824_010 Hb_010712_020--Hb_011824_010 Hb_010712_020--Hb_001863_290 Hb_010712_020--Hb_001141_170 Hb_000160_230 Hb_000160_230 Hb_010712_020--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_010712_020--Hb_007810_140 Hb_001863_290--Hb_107258_010 Hb_001863_290--Hb_011824_010 Hb_001863_290--Hb_001442_080 Hb_004564_010 Hb_004564_010 Hb_001863_290--Hb_004564_010 Hb_001442_080--Hb_107258_010 Hb_001442_080--Hb_004564_010 Hb_178389_020 Hb_178389_020 Hb_001442_080--Hb_178389_020 Hb_000483_020 Hb_000483_020 Hb_001442_080--Hb_000483_020 Hb_000487_170--Hb_010712_020 Hb_000411_060 Hb_000411_060 Hb_000487_170--Hb_000411_060 Hb_000487_170--Hb_001141_170 Hb_002311_050 Hb_002311_050 Hb_000487_170--Hb_002311_050 Hb_007342_020 Hb_007342_020 Hb_000487_170--Hb_007342_020 Hb_012019_030 Hb_012019_030 Hb_001141_170--Hb_012019_030 Hb_001114_300 Hb_001114_300 Hb_001141_170--Hb_001114_300 Hb_004195_040 Hb_004195_040 Hb_001141_170--Hb_004195_040 Hb_000859_040 Hb_000859_040 Hb_001141_170--Hb_000859_040 Hb_001141_170--Hb_011824_010 Hb_107258_010--Hb_011824_010 Hb_107258_010--Hb_004564_010 Hb_012660_010 Hb_012660_010 Hb_107258_010--Hb_012660_010 Hb_107258_010--Hb_010712_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0468027 22.7778 0.720055 2.21552 0.0431094 0.00655744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0170252 0.0133971 0.10223 147.382 3.39135

CAGE analysis