Hb_001863_290

Information

Type -
Description -
Location Contig1863: 260162-262002
Sequence    

Annotation

kegg
ID pop:POPTR_0002s09860g
description POPTRDRAFT_1071736; UDP-glucuronosyltransferase family protein
nr
ID XP_012067890.1
description PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
swissprot
ID F8WKW1
description 7-deoxyloganetin glucosyltransferase OS=Gardenia jasminoides GN=UGT85A24 PE=1 SV=1
trembl
ID A0A067LBA6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15806 PE=3 SV=1
Gene Ontology
ID GO:0047213
description 7-deoxyloganetin glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18356: 260168-261974
cDNA
(Sanger)
(ID:Location)		 004_I09.ab1: 260168-261061 , 050_I18.ab1: 260173-260554

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_290 0.0 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
2 Hb_107258_010 0.0363521792 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
3 Hb_011824_010 0.0530671751 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
4 Hb_001442_080 0.0540814625 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
5 Hb_010712_020 0.0586801448 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
6 Hb_004564_010 0.06175558 - - receptor-kinase, putative [Ricinus communis]
7 Hb_064398_010 0.0710005146 - - cytochrome P450, putative [Ricinus communis]
8 Hb_012660_010 0.0801154883 - - hypothetical protein JCGZ_25971 [Jatropha curcas]
9 Hb_002615_050 0.0807782643 - - ATP-binding cassette transporter, putative [Ricinus communis]
10 Hb_007810_140 0.0853197264 - - Ankyrin repeat-containing protein [Medicago truncatula]
11 Hb_000160_230 0.0873497194 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
12 Hb_016172_010 0.0883074206 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
13 Hb_139460_010 0.0884276511 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
14 Hb_003855_070 0.088768346 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
15 Hb_178389_020 0.0902564858 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
16 Hb_001288_010 0.091510298 - - -
17 Hb_001141_170 0.0937854573 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
18 Hb_000859_040 0.09449663 - - Early nodulin 16 precursor, putative [Ricinus communis]
19 Hb_011856_010 0.0980082228 - - cytochrome P450, putative [Ricinus communis]
20 Hb_002900_020 0.0981535884 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]

Gene co-expression network

sample Hb_001863_290 Hb_001863_290 Hb_107258_010 Hb_107258_010 Hb_001863_290--Hb_107258_010 Hb_011824_010 Hb_011824_010 Hb_001863_290--Hb_011824_010 Hb_001442_080 Hb_001442_080 Hb_001863_290--Hb_001442_080 Hb_010712_020 Hb_010712_020 Hb_001863_290--Hb_010712_020 Hb_004564_010 Hb_004564_010 Hb_001863_290--Hb_004564_010 Hb_064398_010 Hb_064398_010 Hb_001863_290--Hb_064398_010 Hb_107258_010--Hb_001442_080 Hb_107258_010--Hb_011824_010 Hb_107258_010--Hb_004564_010 Hb_012660_010 Hb_012660_010 Hb_107258_010--Hb_012660_010 Hb_107258_010--Hb_010712_020 Hb_011824_010--Hb_010712_020 Hb_139460_010 Hb_139460_010 Hb_011824_010--Hb_139460_010 Hb_011856_010 Hb_011856_010 Hb_011824_010--Hb_011856_010 Hb_002615_050 Hb_002615_050 Hb_011824_010--Hb_002615_050 Hb_001442_080--Hb_004564_010 Hb_178389_020 Hb_178389_020 Hb_001442_080--Hb_178389_020 Hb_001442_080--Hb_064398_010 Hb_000483_020 Hb_000483_020 Hb_001442_080--Hb_000483_020 Hb_001141_170 Hb_001141_170 Hb_010712_020--Hb_001141_170 Hb_000160_230 Hb_000160_230 Hb_010712_020--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_010712_020--Hb_007810_140 Hb_010712_020--Hb_064398_010 Hb_004564_010--Hb_178389_020 Hb_004564_010--Hb_002615_050 Hb_001288_010 Hb_001288_010 Hb_004564_010--Hb_001288_010 Hb_000487_170 Hb_000487_170 Hb_064398_010--Hb_000487_170 Hb_064398_010--Hb_001141_170 Hb_064398_010--Hb_107258_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0233028 4.10622 0.140873 1.106 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0265088 0 0 29.9997 0.350995

CAGE analysis