Hb_011856_010

Information

Type -
Description -
Location Contig11856: 17448-26857
Sequence    

Annotation

kegg
ID rcu:RCOM_1044930
description cytochrome P450, putative (EC:1.14.13.89)
nr
ID XP_002523472.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q6WNQ8
description Cytochrome P450 81E8 OS=Medicago truncatula GN=CYP81E8 PE=2 SV=1
trembl
ID B9SBV3
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1044930 PE=3 SV=1
Gene Ontology
ID GO:0005488
description isoflavone 3 -hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05504: 17684-17985 , PASA_asmbl_05505: 23388-23501 , PASA_asmbl_05506: 26489-26700
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011856_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_139460_010 0.0227717049 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
3 Hb_001173_050 0.0460398378 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
4 Hb_025526_090 0.0555726336 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
5 Hb_011824_010 0.0582849387 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
6 Hb_002615_050 0.0725172307 - - ATP-binding cassette transporter, putative [Ricinus communis]
7 Hb_004185_040 0.0743270547 - - polygalacturonase, putative [Ricinus communis]
8 Hb_004195_040 0.0803607036 - - salicylic acid methyl transferase [Capsicum annuum]
9 Hb_016172_010 0.0826084763 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
10 Hb_000160_230 0.0831264032 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
11 Hb_122574_020 0.0837152862 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
12 Hb_010712_020 0.0854686102 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
13 Hb_007810_140 0.0855232776 - - Ankyrin repeat-containing protein [Medicago truncatula]
14 Hb_001328_110 0.0857394717 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
15 Hb_008705_070 0.0889596479 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
16 Hb_003855_070 0.0890511618 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
17 Hb_000003_470 0.0900665494 - - conserved hypothetical protein [Ricinus communis]
18 Hb_012019_030 0.0923453698 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
19 Hb_107258_010 0.0949945988 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
20 Hb_039342_030 0.0959879551 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011856_010 Hb_011856_010 Hb_139460_010 Hb_139460_010 Hb_011856_010--Hb_139460_010 Hb_001173_050 Hb_001173_050 Hb_011856_010--Hb_001173_050 Hb_025526_090 Hb_025526_090 Hb_011856_010--Hb_025526_090 Hb_011824_010 Hb_011824_010 Hb_011856_010--Hb_011824_010 Hb_002615_050 Hb_002615_050 Hb_011856_010--Hb_002615_050 Hb_004185_040 Hb_004185_040 Hb_011856_010--Hb_004185_040 Hb_139460_010--Hb_011824_010 Hb_139460_010--Hb_002615_050 Hb_139460_010--Hb_001173_050 Hb_000160_230 Hb_000160_230 Hb_139460_010--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_139460_010--Hb_007810_140 Hb_001173_050--Hb_025526_090 Hb_001173_050--Hb_004185_040 Hb_000567_310 Hb_000567_310 Hb_001173_050--Hb_000567_310 Hb_001328_110 Hb_001328_110 Hb_001173_050--Hb_001328_110 Hb_000003_470 Hb_000003_470 Hb_025526_090--Hb_000003_470 Hb_025526_090--Hb_001328_110 Hb_016172_010 Hb_016172_010 Hb_025526_090--Hb_016172_010 Hb_008705_070 Hb_008705_070 Hb_025526_090--Hb_008705_070 Hb_010712_020 Hb_010712_020 Hb_011824_010--Hb_010712_020 Hb_001863_290 Hb_001863_290 Hb_011824_010--Hb_001863_290 Hb_107258_010 Hb_107258_010 Hb_011824_010--Hb_107258_010 Hb_011824_010--Hb_002615_050 Hb_002615_050--Hb_007810_140 Hb_002615_050--Hb_000160_230 Hb_006196_020 Hb_006196_020 Hb_002615_050--Hb_006196_020 Hb_000859_040 Hb_000859_040 Hb_002615_050--Hb_000859_040 Hb_004195_040 Hb_004195_040 Hb_004185_040--Hb_004195_040 Hb_012019_030 Hb_012019_030 Hb_004185_040--Hb_012019_030 Hb_004185_040--Hb_139460_010 Hb_000813_120 Hb_000813_120 Hb_004185_040--Hb_000813_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.351654 0.0244653 0.107016 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.88521 0

CAGE analysis