Hb_000813_120

Information

Type -
Description -
Location Contig813: 113491-116900
Sequence    

Annotation

kegg
ID brp:103870465
description serine carboxypeptidase-like 7
nr
ID XP_010555764.1
description PREDICTED: serine carboxypeptidase-like 18 [Tarenaya hassleriana]
swissprot
ID P10619
description Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2
trembl
ID M4CQ73
description Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra006362 PE=4 SV=1
Gene Ontology
ID GO:0004185
description serine carboxypeptidase-like 18

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000813_120 0.0 - - PREDICTED: serine carboxypeptidase-like 18 [Tarenaya hassleriana]
2 Hb_183700_010 0.0706164165 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_039342_030 0.0761394088 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004185_040 0.0765824304 - - polygalacturonase, putative [Ricinus communis]
5 Hb_004195_040 0.0771479368 - - salicylic acid methyl transferase [Capsicum annuum]
6 Hb_012019_030 0.0807909057 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
7 Hb_001173_050 0.0870171084 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
8 Hb_003581_240 0.0878511192 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_002311_050 0.0890240171 - - PREDICTED: uncharacterized protein LOC105122837 isoform X2 [Populus euphratica]
10 Hb_003010_040 0.0943523514 - - hypothetical protein AALP_AA7G248200 [Arabis alpina]
11 Hb_041769_010 0.0944216696 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
12 Hb_016172_010 0.0996499788 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
13 Hb_059162_010 0.1005849231 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_000640_270 0.1015719273 - - PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase 30 [Jatropha curcas]
15 Hb_025526_090 0.1038836043 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
16 Hb_011856_010 0.1043211558 - - cytochrome P450, putative [Ricinus communis]
17 Hb_005731_080 0.1076926115 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
18 Hb_139460_010 0.1091408449 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
19 Hb_006478_190 0.1097215046 - - lipid binding protein, putative [Ricinus communis]
20 Hb_000101_050 0.1105857175 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000813_120 Hb_000813_120 Hb_183700_010 Hb_183700_010 Hb_000813_120--Hb_183700_010 Hb_039342_030 Hb_039342_030 Hb_000813_120--Hb_039342_030 Hb_004185_040 Hb_004185_040 Hb_000813_120--Hb_004185_040 Hb_004195_040 Hb_004195_040 Hb_000813_120--Hb_004195_040 Hb_012019_030 Hb_012019_030 Hb_000813_120--Hb_012019_030 Hb_001173_050 Hb_001173_050 Hb_000813_120--Hb_001173_050 Hb_003581_240 Hb_003581_240 Hb_183700_010--Hb_003581_240 Hb_002766_040 Hb_002766_040 Hb_183700_010--Hb_002766_040 Hb_007735_010 Hb_007735_010 Hb_183700_010--Hb_007735_010 Hb_014113_010 Hb_014113_010 Hb_183700_010--Hb_014113_010 Hb_003010_040 Hb_003010_040 Hb_183700_010--Hb_003010_040 Hb_016172_010 Hb_016172_010 Hb_039342_030--Hb_016172_010 Hb_006196_020 Hb_006196_020 Hb_039342_030--Hb_006196_020 Hb_008705_070 Hb_008705_070 Hb_039342_030--Hb_008705_070 Hb_042664_010 Hb_042664_010 Hb_039342_030--Hb_042664_010 Hb_002615_050 Hb_002615_050 Hb_039342_030--Hb_002615_050 Hb_000160_230 Hb_000160_230 Hb_039342_030--Hb_000160_230 Hb_004185_040--Hb_004195_040 Hb_004185_040--Hb_012019_030 Hb_004185_040--Hb_001173_050 Hb_011856_010 Hb_011856_010 Hb_004185_040--Hb_011856_010 Hb_139460_010 Hb_139460_010 Hb_004185_040--Hb_139460_010 Hb_004195_040--Hb_012019_030 Hb_001141_170 Hb_001141_170 Hb_004195_040--Hb_001141_170 Hb_004195_040--Hb_139460_010 Hb_005731_080 Hb_005731_080 Hb_004195_040--Hb_005731_080 Hb_012019_030--Hb_001141_170 Hb_001114_300 Hb_001114_300 Hb_012019_030--Hb_001114_300 Hb_006478_190 Hb_006478_190 Hb_012019_030--Hb_006478_190 Hb_012019_030--Hb_005731_080 Hb_001173_050--Hb_011856_010 Hb_025526_090 Hb_025526_090 Hb_001173_050--Hb_025526_090 Hb_001173_050--Hb_139460_010 Hb_000567_310 Hb_000567_310 Hb_001173_050--Hb_000567_310 Hb_001328_110 Hb_001328_110 Hb_001173_050--Hb_001328_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.180836 0.0290117 0.0149617 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.742149 0

CAGE analysis