Hb_008705_070

Information

Type -
Description -
Location Contig8705: 45134-45532
Sequence    

Annotation

kegg
ID rcu:RCOM_0467980
description hypothetical protein
nr
ID XP_012078027.1
description PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KA66
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13048 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008705_070 0.0 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
2 Hb_001328_110 0.0386220369 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
3 Hb_039342_030 0.0686895865 - - conserved hypothetical protein [Ricinus communis]
4 Hb_025526_090 0.0693847675 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
5 Hb_003052_070 0.0705992321 - - PREDICTED: peroxidase 11 [Jatropha curcas]
6 Hb_016172_010 0.0719655492 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
7 Hb_042664_010 0.0781597651 - - hypothetical protein POPTR_0001s07640g, partial [Populus trichocarpa]
8 Hb_003253_020 0.078383938 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
9 Hb_002615_050 0.0874532729 - - ATP-binding cassette transporter, putative [Ricinus communis]
10 Hb_001173_050 0.0882367616 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
11 Hb_000120_710 0.0883802138 - - unnamed protein product [Vitis vinifera]
12 Hb_011856_010 0.0889596479 - - cytochrome P450, putative [Ricinus communis]
13 Hb_003855_070 0.0893361106 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
14 Hb_006538_050 0.0931632159 - - hypothetical protein RCOM_1308310 [Ricinus communis]
15 Hb_000003_470 0.0943813243 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001901_090 0.0975440701 - - metal ion binding protein, putative [Ricinus communis]
17 Hb_001544_040 0.0986902885 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
18 Hb_002965_020 0.0992880631 - - hypothetical protein JCGZ_18947 [Jatropha curcas]
19 Hb_000567_310 0.09968809 - - Miraculin precursor, putative [Ricinus communis]
20 Hb_000617_340 0.1006471574 - - respiratory burst oxidase B [Manihot esculenta]

Gene co-expression network

sample Hb_008705_070 Hb_008705_070 Hb_001328_110 Hb_001328_110 Hb_008705_070--Hb_001328_110 Hb_039342_030 Hb_039342_030 Hb_008705_070--Hb_039342_030 Hb_025526_090 Hb_025526_090 Hb_008705_070--Hb_025526_090 Hb_003052_070 Hb_003052_070 Hb_008705_070--Hb_003052_070 Hb_016172_010 Hb_016172_010 Hb_008705_070--Hb_016172_010 Hb_042664_010 Hb_042664_010 Hb_008705_070--Hb_042664_010 Hb_001328_110--Hb_003052_070 Hb_006538_050 Hb_006538_050 Hb_001328_110--Hb_006538_050 Hb_000120_710 Hb_000120_710 Hb_001328_110--Hb_000120_710 Hb_001328_110--Hb_025526_090 Hb_000567_310 Hb_000567_310 Hb_001328_110--Hb_000567_310 Hb_039342_030--Hb_016172_010 Hb_006196_020 Hb_006196_020 Hb_039342_030--Hb_006196_020 Hb_039342_030--Hb_042664_010 Hb_002615_050 Hb_002615_050 Hb_039342_030--Hb_002615_050 Hb_000160_230 Hb_000160_230 Hb_039342_030--Hb_000160_230 Hb_001173_050 Hb_001173_050 Hb_025526_090--Hb_001173_050 Hb_011856_010 Hb_011856_010 Hb_025526_090--Hb_011856_010 Hb_000003_470 Hb_000003_470 Hb_025526_090--Hb_000003_470 Hb_025526_090--Hb_016172_010 Hb_003052_070--Hb_000567_310 Hb_027288_010 Hb_027288_010 Hb_003052_070--Hb_027288_010 Hb_007747_030 Hb_007747_030 Hb_003052_070--Hb_007747_030 Hb_003052_070--Hb_006538_050 Hb_003786_060 Hb_003786_060 Hb_003052_070--Hb_003786_060 Hb_016172_010--Hb_002615_050 Hb_011824_010 Hb_011824_010 Hb_016172_010--Hb_011824_010 Hb_016172_010--Hb_006196_020 Hb_042664_010--Hb_006196_020 Hb_001901_090 Hb_001901_090 Hb_042664_010--Hb_001901_090 Hb_042664_010--Hb_002615_050 Hb_002534_080 Hb_002534_080 Hb_042664_010--Hb_002534_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.433732 0.143013 0.157079 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.30387 0

CAGE analysis