Hb_027288_010

Information

Type -
Description -
Location Contig27288: 11505-13572
Sequence    

Annotation

kegg
ID rcu:RCOM_0304730
description mutt domain protein, putative (EC:3.6.1.22)
nr
ID XP_002534364.1
description mutt domain protein, putative [Ricinus communis]
swissprot
ID Q94B74
description Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
trembl
ID B9T7Z5
description Mutt domain protein, putative OS=Ricinus communis GN=RCOM_0304730 PE=3 SV=1
Gene Ontology
ID GO:0000210
description nudix hydrolase 2-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027288_010 0.0 - - mutt domain protein, putative [Ricinus communis]
2 Hb_007483_030 0.0318425814 - - -
3 Hb_003052_070 0.0524310923 - - PREDICTED: peroxidase 11 [Jatropha curcas]
4 Hb_007747_030 0.0609466251 - - PREDICTED: WD repeat-containing protein LWD2-like [Jatropha curcas]
5 Hb_003166_040 0.0689059766 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
6 Hb_000567_310 0.0732051646 - - Miraculin precursor, putative [Ricinus communis]
7 Hb_002272_160 0.0809756446 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_127743_030 0.0850796418 - - amino acid transporter, putative [Ricinus communis]
9 Hb_003581_240 0.0947501911 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_003786_060 0.0987532025 - - PREDICTED: transmembrane protein 220 [Jatropha curcas]
11 Hb_001328_110 0.0995334181 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
12 Hb_000407_110 0.0997020283 - - ripening-induced ACC oxidase [Carica papaya]
13 Hb_058526_010 0.0999981897 - - -
14 Hb_001173_050 0.1010255739 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
15 Hb_008705_070 0.1029052536 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
16 Hb_002374_110 0.1059285772 - - PREDICTED: uncharacterized protein LOC105638965 [Jatropha curcas]
17 Hb_000758_030 0.108282696 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
18 Hb_004586_080 0.1084458373 - - hypothetical protein POPTR_0002s10520g [Populus trichocarpa]
19 Hb_025526_090 0.1117864245 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
20 Hb_006919_010 0.1133501132 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Vitis vinifera]

Gene co-expression network

sample Hb_027288_010 Hb_027288_010 Hb_007483_030 Hb_007483_030 Hb_027288_010--Hb_007483_030 Hb_003052_070 Hb_003052_070 Hb_027288_010--Hb_003052_070 Hb_007747_030 Hb_007747_030 Hb_027288_010--Hb_007747_030 Hb_003166_040 Hb_003166_040 Hb_027288_010--Hb_003166_040 Hb_000567_310 Hb_000567_310 Hb_027288_010--Hb_000567_310 Hb_002272_160 Hb_002272_160 Hb_027288_010--Hb_002272_160 Hb_007483_030--Hb_007747_030 Hb_007483_030--Hb_003052_070 Hb_007483_030--Hb_003166_040 Hb_000407_110 Hb_000407_110 Hb_007483_030--Hb_000407_110 Hb_007483_030--Hb_002272_160 Hb_003052_070--Hb_000567_310 Hb_001328_110 Hb_001328_110 Hb_003052_070--Hb_001328_110 Hb_003052_070--Hb_007747_030 Hb_006538_050 Hb_006538_050 Hb_003052_070--Hb_006538_050 Hb_003786_060 Hb_003786_060 Hb_003052_070--Hb_003786_060 Hb_007747_030--Hb_003786_060 Hb_007747_030--Hb_003166_040 Hb_058526_010 Hb_058526_010 Hb_007747_030--Hb_058526_010 Hb_127743_030 Hb_127743_030 Hb_003166_040--Hb_127743_030 Hb_003166_040--Hb_058526_010 Hb_002374_110 Hb_002374_110 Hb_003166_040--Hb_002374_110 Hb_007432_050 Hb_007432_050 Hb_003166_040--Hb_007432_050 Hb_000567_310--Hb_006538_050 Hb_000567_310--Hb_001328_110 Hb_001173_050 Hb_001173_050 Hb_000567_310--Hb_001173_050 Hb_000567_310--Hb_003786_060 Hb_000441_170 Hb_000441_170 Hb_002272_160--Hb_000441_170 Hb_002272_160--Hb_003052_070 Hb_002272_160--Hb_007747_030 Hb_002272_160--Hb_000567_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.196787 0.0837393 0.0701033 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.895167 0

CAGE analysis