Hb_007483_030

Information

Type -
Description -
Location Contig7483: 14676-21648
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007483_030 0.0 - - -
2 Hb_027288_010 0.0318425814 - - mutt domain protein, putative [Ricinus communis]
3 Hb_007747_030 0.0594559566 - - PREDICTED: WD repeat-containing protein LWD2-like [Jatropha curcas]
4 Hb_003052_070 0.0719402312 - - PREDICTED: peroxidase 11 [Jatropha curcas]
5 Hb_003166_040 0.0744931221 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
6 Hb_000407_110 0.0758735851 - - ripening-induced ACC oxidase [Carica papaya]
7 Hb_002272_160 0.0903458458 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_127743_030 0.093002929 - - amino acid transporter, putative [Ricinus communis]
9 Hb_003581_240 0.093006713 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_058526_010 0.0951073061 - - -
11 Hb_004586_080 0.0963979401 - - hypothetical protein POPTR_0002s10520g [Populus trichocarpa]
12 Hb_002374_110 0.1005585406 - - PREDICTED: uncharacterized protein LOC105638965 [Jatropha curcas]
13 Hb_006919_010 0.1014425255 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Vitis vinifera]
14 Hb_000567_310 0.101739817 - - Miraculin precursor, putative [Ricinus communis]
15 Hb_000327_300 0.1079623924 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]
16 Hb_008080_040 0.1085846207 - - hypothetical protein EUGRSUZ_D00834 [Eucalyptus grandis]
17 Hb_008705_070 0.1090363056 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
18 Hb_003786_060 0.1095558911 - - PREDICTED: transmembrane protein 220 [Jatropha curcas]
19 Hb_001328_110 0.1132148346 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
20 Hb_000038_090 0.1137521483 transcription factor TF Family: NAC hypothetical protein POPTR_0002s05820g [Populus trichocarpa]

Gene co-expression network

sample Hb_007483_030 Hb_007483_030 Hb_027288_010 Hb_027288_010 Hb_007483_030--Hb_027288_010 Hb_007747_030 Hb_007747_030 Hb_007483_030--Hb_007747_030 Hb_003052_070 Hb_003052_070 Hb_007483_030--Hb_003052_070 Hb_003166_040 Hb_003166_040 Hb_007483_030--Hb_003166_040 Hb_000407_110 Hb_000407_110 Hb_007483_030--Hb_000407_110 Hb_002272_160 Hb_002272_160 Hb_007483_030--Hb_002272_160 Hb_027288_010--Hb_003052_070 Hb_027288_010--Hb_007747_030 Hb_027288_010--Hb_003166_040 Hb_000567_310 Hb_000567_310 Hb_027288_010--Hb_000567_310 Hb_027288_010--Hb_002272_160 Hb_007747_030--Hb_003052_070 Hb_003786_060 Hb_003786_060 Hb_007747_030--Hb_003786_060 Hb_007747_030--Hb_003166_040 Hb_058526_010 Hb_058526_010 Hb_007747_030--Hb_058526_010 Hb_003052_070--Hb_000567_310 Hb_001328_110 Hb_001328_110 Hb_003052_070--Hb_001328_110 Hb_006538_050 Hb_006538_050 Hb_003052_070--Hb_006538_050 Hb_003052_070--Hb_003786_060 Hb_127743_030 Hb_127743_030 Hb_003166_040--Hb_127743_030 Hb_003166_040--Hb_058526_010 Hb_002374_110 Hb_002374_110 Hb_003166_040--Hb_002374_110 Hb_007432_050 Hb_007432_050 Hb_003166_040--Hb_007432_050 Hb_006919_010 Hb_006919_010 Hb_000407_110--Hb_006919_010 Hb_001609_080 Hb_001609_080 Hb_000407_110--Hb_001609_080 Hb_008080_040 Hb_008080_040 Hb_000407_110--Hb_008080_040 Hb_005653_100 Hb_005653_100 Hb_000407_110--Hb_005653_100 Hb_004586_080 Hb_004586_080 Hb_000407_110--Hb_004586_080 Hb_000441_170 Hb_000441_170 Hb_002272_160--Hb_000441_170 Hb_002272_160--Hb_003052_070 Hb_002272_160--Hb_007747_030 Hb_002272_160--Hb_000567_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0550169 0.0308675 0.017518 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.268414 0

CAGE analysis