Hb_003052_070

Information

Type -
Description -
Location Contig3052: 51018-53680
Sequence    

Annotation

kegg
ID pop:POPTR_0010s14460g
description POPTRDRAFT_882913; Peroxidase 11 precursor family protein
nr
ID XP_012080575.1
description PREDICTED: peroxidase 11 [Jatropha curcas]
swissprot
ID Q96519
description Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1
trembl
ID W8PWG5
description Peroxidase OS=Populus trichocarpa GN=PRX56 PE=2 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003052_070 0.0 - - PREDICTED: peroxidase 11 [Jatropha curcas]
2 Hb_000567_310 0.0436255745 - - Miraculin precursor, putative [Ricinus communis]
3 Hb_001328_110 0.0523060893 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
4 Hb_027288_010 0.0524310923 - - mutt domain protein, putative [Ricinus communis]
5 Hb_007747_030 0.0632918143 - - PREDICTED: WD repeat-containing protein LWD2-like [Jatropha curcas]
6 Hb_006538_050 0.0637103504 - - hypothetical protein RCOM_1308310 [Ricinus communis]
7 Hb_003786_060 0.0660679902 - - PREDICTED: transmembrane protein 220 [Jatropha curcas]
8 Hb_008705_070 0.0705992321 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
9 Hb_007483_030 0.0719402312 - - -
10 Hb_025526_090 0.0843599757 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
11 Hb_001173_050 0.0850471758 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
12 Hb_002272_160 0.0925405131 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
13 Hb_000120_710 0.10027177 - - unnamed protein product [Vitis vinifera]
14 Hb_000758_030 0.1043623508 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
15 Hb_003166_040 0.1048431142 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
16 Hb_000441_170 0.1052290117 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
17 Hb_098795_010 0.1068808805 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Jatropha curcas]
18 Hb_000003_470 0.1081202171 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003253_020 0.108793604 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
20 Hb_011856_010 0.1099883922 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_003052_070 Hb_003052_070 Hb_000567_310 Hb_000567_310 Hb_003052_070--Hb_000567_310 Hb_001328_110 Hb_001328_110 Hb_003052_070--Hb_001328_110 Hb_027288_010 Hb_027288_010 Hb_003052_070--Hb_027288_010 Hb_007747_030 Hb_007747_030 Hb_003052_070--Hb_007747_030 Hb_006538_050 Hb_006538_050 Hb_003052_070--Hb_006538_050 Hb_003786_060 Hb_003786_060 Hb_003052_070--Hb_003786_060 Hb_000567_310--Hb_006538_050 Hb_000567_310--Hb_001328_110 Hb_000567_310--Hb_027288_010 Hb_001173_050 Hb_001173_050 Hb_000567_310--Hb_001173_050 Hb_000567_310--Hb_003786_060 Hb_008705_070 Hb_008705_070 Hb_001328_110--Hb_008705_070 Hb_001328_110--Hb_006538_050 Hb_000120_710 Hb_000120_710 Hb_001328_110--Hb_000120_710 Hb_025526_090 Hb_025526_090 Hb_001328_110--Hb_025526_090 Hb_007483_030 Hb_007483_030 Hb_027288_010--Hb_007483_030 Hb_027288_010--Hb_007747_030 Hb_003166_040 Hb_003166_040 Hb_027288_010--Hb_003166_040 Hb_002272_160 Hb_002272_160 Hb_027288_010--Hb_002272_160 Hb_007747_030--Hb_007483_030 Hb_007747_030--Hb_003786_060 Hb_007747_030--Hb_003166_040 Hb_058526_010 Hb_058526_010 Hb_007747_030--Hb_058526_010 Hb_006538_050--Hb_003786_060 Hb_006538_050--Hb_000120_710 Hb_000617_340 Hb_000617_340 Hb_006538_050--Hb_000617_340 Hb_003786_060--Hb_001328_110 Hb_000933_200 Hb_000933_200 Hb_003786_060--Hb_000933_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.246646 0.0930781 0.126664 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.44348 0

CAGE analysis