Hb_000933_200

Information

Type -
Description -
Location Contig933: 270808-272157
Sequence    

Annotation

kegg
ID rcu:RCOM_1622030
description Cationic peroxidase 2 precursor, putative (EC:1.11.1.7)
nr
ID XP_002512127.1
description Cationic peroxidase 2 precursor, putative [Ricinus communis]
swissprot
ID P22196
description Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1
trembl
ID B9RCX9
description Peroxidase OS=Ricinus communis GN=RCOM_1622030 PE=3 SV=1
Gene Ontology
ID GO:0005488
description bacterial-induced peroxidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000933_200 0.0 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
2 Hb_003253_020 0.0482445332 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
3 Hb_000617_340 0.0765451424 - - respiratory burst oxidase B [Manihot esculenta]
4 Hb_010407_120 0.087791062 - - PREDICTED: glutathione transferase GST 23-like [Jatropha curcas]
5 Hb_000513_110 0.0890313417 - - PREDICTED: germin-like protein subfamily 1 member 13 [Populus euphratica]
6 Hb_001544_040 0.0921761274 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
7 Hb_003786_060 0.0960674364 - - PREDICTED: transmembrane protein 220 [Jatropha curcas]
8 Hb_000120_710 0.0973686613 - - unnamed protein product [Vitis vinifera]
9 Hb_001901_090 0.0978500751 - - metal ion binding protein, putative [Ricinus communis]
10 Hb_006538_050 0.0995062476 - - hypothetical protein RCOM_1308310 [Ricinus communis]
11 Hb_000503_040 0.1035018675 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
12 Hb_000631_130 0.1060343737 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
13 Hb_001328_110 0.1071936425 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
14 Hb_000038_090 0.1097854494 transcription factor TF Family: NAC hypothetical protein POPTR_0002s05820g [Populus trichocarpa]
15 Hb_008705_070 0.1156310954 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
16 Hb_007747_030 0.1204466252 - - PREDICTED: WD repeat-containing protein LWD2-like [Jatropha curcas]
17 Hb_003052_070 0.1208922939 - - PREDICTED: peroxidase 11 [Jatropha curcas]
18 Hb_001473_100 0.1211422126 - - chalcone synthase 1 [Jatropha curcas]
19 Hb_002232_370 0.1259378494 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
20 Hb_007527_020 0.1259976837 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000933_200 Hb_000933_200 Hb_003253_020 Hb_003253_020 Hb_000933_200--Hb_003253_020 Hb_000617_340 Hb_000617_340 Hb_000933_200--Hb_000617_340 Hb_010407_120 Hb_010407_120 Hb_000933_200--Hb_010407_120 Hb_000513_110 Hb_000513_110 Hb_000933_200--Hb_000513_110 Hb_001544_040 Hb_001544_040 Hb_000933_200--Hb_001544_040 Hb_003786_060 Hb_003786_060 Hb_000933_200--Hb_003786_060 Hb_001901_090 Hb_001901_090 Hb_003253_020--Hb_001901_090 Hb_003253_020--Hb_000617_340 Hb_003253_020--Hb_001544_040 Hb_003253_020--Hb_000513_110 Hb_000120_710 Hb_000120_710 Hb_003253_020--Hb_000120_710 Hb_000617_340--Hb_000120_710 Hb_000617_340--Hb_001544_040 Hb_000617_340--Hb_000513_110 Hb_006538_050 Hb_006538_050 Hb_000617_340--Hb_006538_050 Hb_010407_120--Hb_001544_040 Hb_007532_050 Hb_007532_050 Hb_010407_120--Hb_007532_050 Hb_007527_020 Hb_007527_020 Hb_010407_120--Hb_007527_020 Hb_010407_120--Hb_003253_020 Hb_000438_190 Hb_000438_190 Hb_010407_120--Hb_000438_190 Hb_000513_110--Hb_000120_710 Hb_000513_110--Hb_001544_040 Hb_000513_110--Hb_007527_020 Hb_000513_110--Hb_001901_090 Hb_001544_040--Hb_000120_710 Hb_005356_010 Hb_005356_010 Hb_001544_040--Hb_005356_010 Hb_003786_060--Hb_006538_050 Hb_003052_070 Hb_003052_070 Hb_003786_060--Hb_003052_070 Hb_007747_030 Hb_007747_030 Hb_003786_060--Hb_007747_030 Hb_000567_310 Hb_000567_310 Hb_003786_060--Hb_000567_310 Hb_001328_110 Hb_001328_110 Hb_003786_060--Hb_001328_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0642491 0.0808735 0.0868052 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.05124 0

CAGE analysis