Hb_000438_190

Information

Type -
Description -
Location Contig438: 150456-152156
Sequence    

Annotation

kegg
ID rcu:RCOM_0688840
description Peroxidase 52 precursor, putative (EC:1.11.1.7)
nr
ID XP_012091189.1
description PREDICTED: peroxidase 4-like [Jatropha curcas]
swissprot
ID A7NY33
description Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1
trembl
ID A0A067JCX4
description Peroxidase OS=Jatropha curcas GN=JCGZ_03352 PE=3 SV=1
Gene Ontology
ID GO:0005618
description peroxidase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000438_190 0.0 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
2 Hb_004544_070 0.0743439592 - - unnamed protein product [Vitis vinifera]
3 Hb_148914_010 0.07922212 - - glutathione s-transferase, putative [Ricinus communis]
4 Hb_002232_370 0.085133123 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
5 Hb_002749_070 0.0859413262 - - PREDICTED: uncharacterized protein LOC105635941 [Jatropha curcas]
6 Hb_011145_020 0.086677086 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
7 Hb_010407_120 0.0955864848 - - PREDICTED: glutathione transferase GST 23-like [Jatropha curcas]
8 Hb_002232_400 0.0961354493 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH25-like [Jatropha curcas]
9 Hb_027141_010 0.0967005278 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
10 Hb_012796_050 0.0972835764 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
11 Hb_033363_080 0.0992654081 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
12 Hb_002048_010 0.1059071204 - - unknown [Lotus japonicus]
13 Hb_000245_140 0.1088611468 - - PREDICTED: CASP-like protein 3A1 [Jatropha curcas]
14 Hb_076895_020 0.1092391453 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]
15 Hb_000025_740 0.1095631399 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
16 Hb_002965_020 0.1105161881 - - hypothetical protein JCGZ_18947 [Jatropha curcas]
17 Hb_020332_040 0.1136010116 - - PREDICTED: alcohol dehydrogenase 1-like [Jatropha curcas]
18 Hb_011486_030 0.1145374106 - - branched-chain amino acid aminotransferase, putative [Ricinus communis]
19 Hb_000648_120 0.1155386475 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1 [Vitis vinifera]
20 Hb_006006_070 0.1183198494 - - UDP-glucosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000438_190 Hb_000438_190 Hb_004544_070 Hb_004544_070 Hb_000438_190--Hb_004544_070 Hb_148914_010 Hb_148914_010 Hb_000438_190--Hb_148914_010 Hb_002232_370 Hb_002232_370 Hb_000438_190--Hb_002232_370 Hb_002749_070 Hb_002749_070 Hb_000438_190--Hb_002749_070 Hb_011145_020 Hb_011145_020 Hb_000438_190--Hb_011145_020 Hb_010407_120 Hb_010407_120 Hb_000438_190--Hb_010407_120 Hb_004544_070--Hb_002749_070 Hb_164283_010 Hb_164283_010 Hb_004544_070--Hb_164283_010 Hb_018591_010 Hb_018591_010 Hb_004544_070--Hb_018591_010 Hb_004544_070--Hb_011145_020 Hb_006637_040 Hb_006637_040 Hb_004544_070--Hb_006637_040 Hb_012796_050 Hb_012796_050 Hb_148914_010--Hb_012796_050 Hb_148914_010--Hb_002232_370 Hb_000245_140 Hb_000245_140 Hb_148914_010--Hb_000245_140 Hb_002965_020 Hb_002965_020 Hb_148914_010--Hb_002965_020 Hb_148914_010--Hb_010407_120 Hb_002232_370--Hb_000245_140 Hb_002232_370--Hb_002965_020 Hb_002232_400 Hb_002232_400 Hb_002232_370--Hb_002232_400 Hb_002232_370--Hb_012796_050 Hb_002749_070--Hb_164283_010 Hb_002749_070--Hb_011145_020 Hb_000025_740 Hb_000025_740 Hb_002749_070--Hb_000025_740 Hb_002749_070--Hb_018591_010 Hb_033363_080 Hb_033363_080 Hb_011145_020--Hb_033363_080 Hb_011145_020--Hb_164283_010 Hb_001691_060 Hb_001691_060 Hb_011145_020--Hb_001691_060 Hb_011145_020--Hb_018591_010 Hb_001544_040 Hb_001544_040 Hb_010407_120--Hb_001544_040 Hb_007532_050 Hb_007532_050 Hb_010407_120--Hb_007532_050 Hb_000933_200 Hb_000933_200 Hb_010407_120--Hb_000933_200 Hb_007527_020 Hb_007527_020 Hb_010407_120--Hb_007527_020 Hb_003253_020 Hb_003253_020 Hb_010407_120--Hb_003253_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0212543 5.99147 4.21219 8.7042 0 0.0477151
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0389397 0.0306314 0 69.5799 3.23914

CAGE analysis