Hb_139460_010

Information

Type -
Description -
Location Contig139460: 6279-11077
Sequence    

Annotation

kegg
ID mus:103982461
description beta-glucosidase 18-like
nr
ID XP_012071272.1
description PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
swissprot
ID Q7XSK0
description Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=3 SV=2
trembl
ID A0A067L5J5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01141 PE=3 SV=1
Gene Ontology
ID GO:0004553
description beta-glucosidase 18-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_139460_010 0.0 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
2 Hb_011856_010 0.0227717049 - - cytochrome P450, putative [Ricinus communis]
3 Hb_011824_010 0.0484231514 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
4 Hb_002615_050 0.0629055013 - - ATP-binding cassette transporter, putative [Ricinus communis]
5 Hb_001173_050 0.0657086694 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
6 Hb_000160_230 0.0677216232 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
7 Hb_007810_140 0.0686117496 - - Ankyrin repeat-containing protein [Medicago truncatula]
8 Hb_025526_090 0.070782958 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
9 Hb_004195_040 0.0729750971 - - salicylic acid methyl transferase [Capsicum annuum]
10 Hb_122574_020 0.073872913 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
11 Hb_010712_020 0.0750541817 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
12 Hb_004185_040 0.0757217332 - - polygalacturonase, putative [Ricinus communis]
13 Hb_000859_040 0.0805598179 - - Early nodulin 16 precursor, putative [Ricinus communis]
14 Hb_012019_030 0.0819247486 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
15 Hb_016172_010 0.0835987153 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
16 Hb_001863_290 0.0884276511 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
17 Hb_107258_010 0.089742868 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
18 Hb_001141_170 0.0906708506 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
19 Hb_003855_070 0.0966453978 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
20 Hb_039342_030 0.0968848623 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_139460_010 Hb_139460_010 Hb_011856_010 Hb_011856_010 Hb_139460_010--Hb_011856_010 Hb_011824_010 Hb_011824_010 Hb_139460_010--Hb_011824_010 Hb_002615_050 Hb_002615_050 Hb_139460_010--Hb_002615_050 Hb_001173_050 Hb_001173_050 Hb_139460_010--Hb_001173_050 Hb_000160_230 Hb_000160_230 Hb_139460_010--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_139460_010--Hb_007810_140 Hb_011856_010--Hb_001173_050 Hb_025526_090 Hb_025526_090 Hb_011856_010--Hb_025526_090 Hb_011856_010--Hb_011824_010 Hb_011856_010--Hb_002615_050 Hb_004185_040 Hb_004185_040 Hb_011856_010--Hb_004185_040 Hb_010712_020 Hb_010712_020 Hb_011824_010--Hb_010712_020 Hb_001863_290 Hb_001863_290 Hb_011824_010--Hb_001863_290 Hb_107258_010 Hb_107258_010 Hb_011824_010--Hb_107258_010 Hb_011824_010--Hb_002615_050 Hb_002615_050--Hb_007810_140 Hb_002615_050--Hb_000160_230 Hb_006196_020 Hb_006196_020 Hb_002615_050--Hb_006196_020 Hb_000859_040 Hb_000859_040 Hb_002615_050--Hb_000859_040 Hb_001173_050--Hb_025526_090 Hb_001173_050--Hb_004185_040 Hb_000567_310 Hb_000567_310 Hb_001173_050--Hb_000567_310 Hb_001328_110 Hb_001328_110 Hb_001173_050--Hb_001328_110 Hb_000160_230--Hb_007810_140 Hb_000160_230--Hb_000859_040 Hb_000160_230--Hb_006196_020 Hb_000160_230--Hb_011824_010 Hb_000160_230--Hb_010712_020 Hb_007810_140--Hb_000859_040 Hb_007810_140--Hb_006196_020 Hb_007810_140--Hb_011824_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.50372 0.0656533 0.400838 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 8.25909 0

CAGE analysis