Hb_012019_020

Information

Type -
Description -
Location Contig12019: 14434-19878
Sequence    

Annotation

kegg
ID rcu:RCOM_0646530
description Nonspecific lipid-transfer protein precursor, putative
nr
ID XP_002524756.1
description Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
swissprot
ID Q9ZQI8
description Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1
trembl
ID B9SFI7
description Nonspecific lipid-transfer protein, putative OS=Ricinus communis GN=RCOM_0646530 PE=4 SV=1
Gene Ontology
ID GO:0008233
description non-specific lipid-transfer protein at2g13820

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012019_020 0.0 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
2 Hb_001013_040 0.1066998925 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
3 Hb_001596_040 0.1072068168 - - PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Populus euphratica]
4 Hb_000101_050 0.1131814237 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
5 Hb_001952_110 0.1164554253 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
6 Hb_007875_070 0.1179551152 - - hypothetical protein JCGZ_05017 [Jatropha curcas]
7 Hb_006452_050 0.1221917545 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
8 Hb_002171_070 0.1232074853 desease resistance Gene Name: NB-ARC NBS-LRR resistance gene-like protein ARGH30 [Populus trichocarpa]
9 Hb_006446_060 0.1280858889 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
10 Hb_001838_050 0.1284455417 - - hypothetical protein B456_007G218500 [Gossypium raimondii]
11 Hb_001951_090 0.1312946116 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
12 Hb_003086_200 0.1323429959 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
13 Hb_000556_200 0.1327747544 - - PREDICTED: AT-hook motif nuclear-localized protein 22 [Jatropha curcas]
14 Hb_003031_030 0.1340854692 - - hypothetical protein JCGZ_21288 [Jatropha curcas]
15 Hb_002553_120 0.1349462112 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B [Jatropha curcas]
16 Hb_000381_030 0.1399584029 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
17 Hb_004574_010 0.1415862223 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
18 Hb_012395_070 0.1420565745 - - PREDICTED: probable metal-nicotianamine transporter YSL6 [Jatropha curcas]
19 Hb_041769_010 0.1420753586 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
20 Hb_000237_150 0.1434271882 - - Epoxide hydrolase 2 [Morus notabilis]

Gene co-expression network

sample Hb_012019_020 Hb_012019_020 Hb_001013_040 Hb_001013_040 Hb_012019_020--Hb_001013_040 Hb_001596_040 Hb_001596_040 Hb_012019_020--Hb_001596_040 Hb_000101_050 Hb_000101_050 Hb_012019_020--Hb_000101_050 Hb_001952_110 Hb_001952_110 Hb_012019_020--Hb_001952_110 Hb_007875_070 Hb_007875_070 Hb_012019_020--Hb_007875_070 Hb_006452_050 Hb_006452_050 Hb_012019_020--Hb_006452_050 Hb_001856_060 Hb_001856_060 Hb_001013_040--Hb_001856_060 Hb_000381_030 Hb_000381_030 Hb_001013_040--Hb_000381_030 Hb_001013_040--Hb_007875_070 Hb_001331_040 Hb_001331_040 Hb_001013_040--Hb_001331_040 Hb_002171_070 Hb_002171_070 Hb_001013_040--Hb_002171_070 Hb_001596_040--Hb_002171_070 Hb_002917_030 Hb_002917_030 Hb_001596_040--Hb_002917_030 Hb_003086_200 Hb_003086_200 Hb_001596_040--Hb_003086_200 Hb_004931_060 Hb_004931_060 Hb_001596_040--Hb_004931_060 Hb_000556_200 Hb_000556_200 Hb_001596_040--Hb_000556_200 Hb_006446_060 Hb_006446_060 Hb_000101_050--Hb_006446_060 Hb_041769_010 Hb_041769_010 Hb_000101_050--Hb_041769_010 Hb_001902_180 Hb_001902_180 Hb_000101_050--Hb_001902_180 Hb_005993_070 Hb_005993_070 Hb_000101_050--Hb_005993_070 Hb_005731_080 Hb_005731_080 Hb_000101_050--Hb_005731_080 Hb_059162_010 Hb_059162_010 Hb_000101_050--Hb_059162_010 Hb_001951_090 Hb_001951_090 Hb_001952_110--Hb_001951_090 Hb_001952_110--Hb_001596_040 Hb_001952_110--Hb_000101_050 Hb_008020_010 Hb_008020_010 Hb_001952_110--Hb_008020_010 Hb_005550_070 Hb_005550_070 Hb_001952_110--Hb_005550_070 Hb_008225_080 Hb_008225_080 Hb_007875_070--Hb_008225_080 Hb_000976_020 Hb_000976_020 Hb_007875_070--Hb_000976_020 Hb_000758_030 Hb_000758_030 Hb_007875_070--Hb_000758_030 Hb_008080_040 Hb_008080_040 Hb_007875_070--Hb_008080_040 Hb_007875_070--Hb_000381_030 Hb_002234_150 Hb_002234_150 Hb_006452_050--Hb_002234_150 Hb_112082_030 Hb_112082_030 Hb_006452_050--Hb_112082_030 Hb_006452_050--Hb_000101_050 Hb_000411_060 Hb_000411_060 Hb_006452_050--Hb_000411_060 Hb_006452_050--Hb_000976_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.015622 1.40059 0.225731 0.172118 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0560616 0 3.0933 0.116686

CAGE analysis