Hb_000085_230

Information

Type -
Description -
Location Contig85: 187654-188712
Sequence    

Annotation

kegg
ID rcu:RCOM_0046120
description acyltransferase, putative
nr
ID XP_012070952.1
description PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
swissprot
ID Q9FJ72
description Probable long-chain-alcohol O-fatty-acyltransferase 1 OS=Arabidopsis thaliana GN=AT1 PE=2 SV=1
trembl
ID A0A067KWA6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00985 PE=4 SV=1
Gene Ontology
ID GO:0047196
description long-chain-alcohol o-fatty-acyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000085_230 0.0 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
2 Hb_001894_040 0.0835463849 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
3 Hb_000579_180 0.0857043547 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
4 Hb_001514_210 0.0961517964 - - hypothetical protein VITISV_012133 [Vitis vinifera]
5 Hb_012753_200 0.1099485247 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
6 Hb_000008_080 0.1137697175 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000836_390 0.1152723706 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
8 Hb_008226_120 0.1182990909 - - ATP binding protein, putative [Ricinus communis]
9 Hb_004447_020 0.1200765677 - - carbohydrate binding protein, putative [Ricinus communis]
10 Hb_004218_160 0.1206378434 - - NBS-LRR type disease resistance protein [Medicago truncatula]
11 Hb_001421_010 0.1221175281 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
12 Hb_000657_030 0.1242295375 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
13 Hb_001355_110 0.1244300582 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
14 Hb_003807_020 0.1244390091 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
15 Hb_001102_270 0.1247996726 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
16 Hb_002805_150 0.126626292 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
17 Hb_001636_010 0.1278180528 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
18 Hb_009785_010 0.1296466682 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
19 Hb_002686_390 0.1298948497 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
20 Hb_008783_020 0.1300098681 - - hypothetical protein JCGZ_21284 [Jatropha curcas]

Gene co-expression network

sample Hb_000085_230 Hb_000085_230 Hb_001894_040 Hb_001894_040 Hb_000085_230--Hb_001894_040 Hb_000579_180 Hb_000579_180 Hb_000085_230--Hb_000579_180 Hb_001514_210 Hb_001514_210 Hb_000085_230--Hb_001514_210 Hb_012753_200 Hb_012753_200 Hb_000085_230--Hb_012753_200 Hb_000008_080 Hb_000008_080 Hb_000085_230--Hb_000008_080 Hb_000836_390 Hb_000836_390 Hb_000085_230--Hb_000836_390 Hb_008226_120 Hb_008226_120 Hb_001894_040--Hb_008226_120 Hb_001894_040--Hb_000579_180 Hb_046101_010 Hb_046101_010 Hb_001894_040--Hb_046101_010 Hb_001862_060 Hb_001862_060 Hb_001894_040--Hb_001862_060 Hb_001636_010 Hb_001636_010 Hb_001894_040--Hb_001636_010 Hb_000579_180--Hb_012753_200 Hb_003807_020 Hb_003807_020 Hb_000579_180--Hb_003807_020 Hb_010926_010 Hb_010926_010 Hb_000579_180--Hb_010926_010 Hb_012807_060 Hb_012807_060 Hb_000579_180--Hb_012807_060 Hb_001514_210--Hb_012753_200 Hb_001514_210--Hb_000579_180 Hb_002805_150 Hb_002805_150 Hb_001514_210--Hb_002805_150 Hb_002686_390 Hb_002686_390 Hb_001514_210--Hb_002686_390 Hb_003031_030 Hb_003031_030 Hb_001514_210--Hb_003031_030 Hb_012753_200--Hb_002805_150 Hb_012753_200--Hb_003807_020 Hb_002007_140 Hb_002007_140 Hb_012753_200--Hb_002007_140 Hb_012395_070 Hb_012395_070 Hb_012753_200--Hb_012395_070 Hb_000163_250 Hb_000163_250 Hb_000008_080--Hb_000163_250 Hb_000008_080--Hb_001894_040 Hb_000359_280 Hb_000359_280 Hb_000008_080--Hb_000359_280 Hb_000008_080--Hb_001636_010 Hb_001102_270 Hb_001102_270 Hb_000008_080--Hb_001102_270 Hb_007765_140 Hb_007765_140 Hb_000836_390--Hb_007765_140 Hb_008215_010 Hb_008215_010 Hb_000836_390--Hb_008215_010 Hb_000120_070 Hb_000120_070 Hb_000836_390--Hb_000120_070 Hb_075449_040 Hb_075449_040 Hb_000836_390--Hb_075449_040 Hb_003376_200 Hb_003376_200 Hb_000836_390--Hb_003376_200 Hb_000075_110 Hb_000075_110 Hb_000836_390--Hb_000075_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0876642 3.4619 1.05781 1.0968 0.0193349 0.054476
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0472073 0.0371303 0 4.10077 0.838865

CAGE analysis