Hb_007765_140

Information

Type -
Description -
Location Contig7765: 128568-131551
Sequence    

Annotation

kegg
ID rcu:RCOM_0730410
description peptide transporter, putative
nr
ID XP_012068161.1
description PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
swissprot
ID Q9M390
description Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1
trembl
ID A0A067LDI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08518 PE=3 SV=1
Gene Ontology
ID GO:0016021
description protein nrt1 ptr family -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57840: 128584-131038 , PASA_asmbl_57841: 131581-131719
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007765_140 0.0 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
2 Hb_000836_390 0.0696103661 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
3 Hb_165404_010 0.0724784696 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
4 Hb_000075_110 0.0742650212 - - aldo-keto reductase, putative [Ricinus communis]
5 Hb_075449_040 0.0795748917 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
6 Hb_008215_010 0.0841215825 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000120_070 0.0852569291 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
8 Hb_065230_010 0.1046757163 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
9 Hb_001102_270 0.1075448564 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
10 Hb_000359_280 0.107960507 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
11 Hb_000489_020 0.1169456743 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
12 Hb_000417_120 0.1173931459 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
13 Hb_001894_040 0.1186789471 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
14 Hb_000598_020 0.1201267881 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
15 Hb_003376_200 0.1219836816 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
16 Hb_046101_010 0.1228926498 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
17 Hb_001355_110 0.1236168205 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
18 Hb_000771_030 0.1236812893 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
19 Hb_000008_080 0.1273953783 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000046_590 0.1280411319 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]

Gene co-expression network

sample Hb_007765_140 Hb_007765_140 Hb_000836_390 Hb_000836_390 Hb_007765_140--Hb_000836_390 Hb_165404_010 Hb_165404_010 Hb_007765_140--Hb_165404_010 Hb_000075_110 Hb_000075_110 Hb_007765_140--Hb_000075_110 Hb_075449_040 Hb_075449_040 Hb_007765_140--Hb_075449_040 Hb_008215_010 Hb_008215_010 Hb_007765_140--Hb_008215_010 Hb_000120_070 Hb_000120_070 Hb_007765_140--Hb_000120_070 Hb_000836_390--Hb_008215_010 Hb_000836_390--Hb_000120_070 Hb_000836_390--Hb_075449_040 Hb_003376_200 Hb_003376_200 Hb_000836_390--Hb_003376_200 Hb_000836_390--Hb_000075_110 Hb_165404_010--Hb_000075_110 Hb_065230_010 Hb_065230_010 Hb_165404_010--Hb_065230_010 Hb_165404_010--Hb_008215_010 Hb_165404_010--Hb_075449_040 Hb_165404_010--Hb_000120_070 Hb_000598_020 Hb_000598_020 Hb_000075_110--Hb_000598_020 Hb_000075_110--Hb_000120_070 Hb_000075_110--Hb_008215_010 Hb_006970_150 Hb_006970_150 Hb_000075_110--Hb_006970_150 Hb_046101_010 Hb_046101_010 Hb_075449_040--Hb_046101_010 Hb_075449_040--Hb_000075_110 Hb_000359_280 Hb_000359_280 Hb_075449_040--Hb_000359_280 Hb_008215_010--Hb_000120_070 Hb_000046_590 Hb_000046_590 Hb_008215_010--Hb_000046_590 Hb_003556_070 Hb_003556_070 Hb_000120_070--Hb_003556_070 Hb_000120_070--Hb_006970_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 39.8541 14.8015 12.5672 0.0241224 0.0463414
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0780259 0 0 31.729 4.3624

CAGE analysis