Hb_065230_010

Information

Type -
Description -
Location Contig65230: 3113-13297
Sequence    

Annotation

kegg
ID gmx:100814166
description uncharacterized LOC100814166
nr
ID XP_003524364.1
description PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
swissprot
ID -
description -
trembl
ID K7KRJ2
description Uncharacterized protein OS=Glycine max PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52591: 2849-5560 , PASA_asmbl_52592: 5575-13818
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065230_010 0.0 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
2 Hb_000771_030 0.0636791559 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
3 Hb_131662_010 0.0712042454 - - Insulin-degrading enzyme, putative [Ricinus communis]
4 Hb_002410_010 0.0853397971 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
5 Hb_000098_250 0.0904669083 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
6 Hb_000417_120 0.0941217446 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
7 Hb_020648_020 0.0991895349 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
8 Hb_007765_140 0.1046757163 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
9 Hb_165404_010 0.1049451129 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
10 Hb_002276_100 0.1099695824 - - PREDICTED: UDP-glycosyltransferase 89A2-like [Jatropha curcas]
11 Hb_046101_010 0.1103387738 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
12 Hb_000075_110 0.1107166159 - - aldo-keto reductase, putative [Ricinus communis]
13 Hb_084127_010 0.1115073787 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_000907_120 0.1115309975 transcription factor TF Family: G2-like PREDICTED: transcription repressor KAN1-like [Populus euphratica]
15 Hb_074312_020 0.1128548216 - - cytochrome P450, putative [Ricinus communis]
16 Hb_075449_040 0.1155680433 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
17 Hb_020285_010 0.1168008402 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3, partial [Pyrus x bretschneideri]
18 Hb_000120_070 0.1184494716 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
19 Hb_002529_080 0.1225299671 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]
20 Hb_001369_070 0.1227028669 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_065230_010 Hb_065230_010 Hb_000771_030 Hb_000771_030 Hb_065230_010--Hb_000771_030 Hb_131662_010 Hb_131662_010 Hb_065230_010--Hb_131662_010 Hb_002410_010 Hb_002410_010 Hb_065230_010--Hb_002410_010 Hb_000098_250 Hb_000098_250 Hb_065230_010--Hb_000098_250 Hb_000417_120 Hb_000417_120 Hb_065230_010--Hb_000417_120 Hb_020648_020 Hb_020648_020 Hb_065230_010--Hb_020648_020 Hb_000771_030--Hb_000417_120 Hb_000771_030--Hb_131662_010 Hb_000771_030--Hb_000098_250 Hb_000598_020 Hb_000598_020 Hb_000771_030--Hb_000598_020 Hb_000771_030--Hb_002410_010 Hb_000497_100 Hb_000497_100 Hb_131662_010--Hb_000497_100 Hb_005087_030 Hb_005087_030 Hb_131662_010--Hb_005087_030 Hb_010573_040 Hb_010573_040 Hb_131662_010--Hb_010573_040 Hb_000907_120 Hb_000907_120 Hb_131662_010--Hb_000907_120 Hb_002410_010--Hb_020648_020 Hb_002410_010--Hb_000098_250 Hb_000338_030 Hb_000338_030 Hb_002410_010--Hb_000338_030 Hb_117127_010 Hb_117127_010 Hb_002410_010--Hb_117127_010 Hb_000098_250--Hb_117127_010 Hb_008667_030 Hb_008667_030 Hb_000098_250--Hb_008667_030 Hb_002529_080 Hb_002529_080 Hb_000098_250--Hb_002529_080 Hb_000098_250--Hb_020648_020 Hb_000417_120--Hb_000598_020 Hb_000382_030 Hb_000382_030 Hb_000417_120--Hb_000382_030 Hb_000237_070 Hb_000237_070 Hb_000417_120--Hb_000237_070 Hb_000075_110 Hb_000075_110 Hb_000417_120--Hb_000075_110 Hb_020648_020--Hb_000338_030 Hb_000579_220 Hb_000579_220 Hb_020648_020--Hb_000579_220 Hb_084127_010 Hb_084127_010 Hb_020648_020--Hb_084127_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.23739 0.366475 0.506861 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.636141 0.150583

CAGE analysis