Hb_008667_030

Information

Type -
Description -
Location Contig8667: 17857-30290
Sequence    

Annotation

kegg
ID rcu:RCOM_0522370
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_012071024.1
description PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
swissprot
ID P37119
description Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1
trembl
ID B9S9U3
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0522370 PE=3 SV=1
Gene Ontology
ID GO:0016709
description premnaspirodiene oxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61027: 18659-18760 , PASA_asmbl_61028: 18944-19262 , PASA_asmbl_61032: 23897-24262
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008667_030 0.0 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
2 Hb_002529_080 0.0673287748 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]
3 Hb_117127_010 0.0779833645 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
4 Hb_000098_250 0.0790582075 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
5 Hb_006698_020 0.0839616832 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
6 Hb_000338_030 0.0925068962 transcription factor TF Family: HB hypothetical protein JCGZ_21254 [Jatropha curcas]
7 Hb_000000_070 0.0956357791 - - allene oxide synthase [Hevea brasiliensis]
8 Hb_003914_050 0.0996941879 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
9 Hb_008040_060 0.101881759 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
10 Hb_013720_010 0.1046558928 - - Putative DNA repair RAD23-3 -like protein [Gossypium arboreum]
11 Hb_002410_010 0.1075357131 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
12 Hb_020648_020 0.1163127622 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
13 Hb_174380_010 0.1215095331 - - kinase, putative [Ricinus communis]
14 Hb_001568_120 0.1249727741 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
15 Hb_006615_180 0.1255053081 - - hypothetical protein B456_003G103400 [Gossypium raimondii]
16 Hb_000094_010 0.1259708589 - - lrr receptor protein kinase, putative [Ricinus communis]
17 Hb_005357_270 0.127449468 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
18 Hb_065230_010 0.1304869039 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
19 Hb_000771_030 0.1319986741 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
20 Hb_000331_710 0.1323226186 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_008667_030 Hb_008667_030 Hb_002529_080 Hb_002529_080 Hb_008667_030--Hb_002529_080 Hb_117127_010 Hb_117127_010 Hb_008667_030--Hb_117127_010 Hb_000098_250 Hb_000098_250 Hb_008667_030--Hb_000098_250 Hb_006698_020 Hb_006698_020 Hb_008667_030--Hb_006698_020 Hb_000338_030 Hb_000338_030 Hb_008667_030--Hb_000338_030 Hb_000000_070 Hb_000000_070 Hb_008667_030--Hb_000000_070 Hb_000094_010 Hb_000094_010 Hb_002529_080--Hb_000094_010 Hb_002529_080--Hb_000000_070 Hb_008040_060 Hb_008040_060 Hb_002529_080--Hb_008040_060 Hb_002529_080--Hb_000098_250 Hb_003914_050 Hb_003914_050 Hb_002529_080--Hb_003914_050 Hb_117127_010--Hb_000098_250 Hb_002410_010 Hb_002410_010 Hb_117127_010--Hb_002410_010 Hb_117127_010--Hb_002529_080 Hb_006615_180 Hb_006615_180 Hb_117127_010--Hb_006615_180 Hb_117127_010--Hb_000000_070 Hb_000098_250--Hb_002410_010 Hb_020648_020 Hb_020648_020 Hb_000098_250--Hb_020648_020 Hb_000771_030 Hb_000771_030 Hb_000098_250--Hb_000771_030 Hb_013720_010 Hb_013720_010 Hb_006698_020--Hb_013720_010 Hb_006698_020--Hb_000000_070 Hb_029866_050 Hb_029866_050 Hb_006698_020--Hb_029866_050 Hb_000331_710 Hb_000331_710 Hb_006698_020--Hb_000331_710 Hb_006698_020--Hb_002529_080 Hb_000338_030--Hb_020648_020 Hb_000338_030--Hb_002410_010 Hb_000338_030--Hb_000098_250 Hb_000338_030--Hb_002529_080 Hb_000338_030--Hb_117127_010 Hb_000000_070--Hb_006615_180 Hb_001568_120 Hb_001568_120 Hb_000000_070--Hb_001568_120 Hb_004122_020 Hb_004122_020 Hb_000000_070--Hb_004122_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.16706 0.979029 0.872423 0 0.0058702
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.732706 0.332341

CAGE analysis