Hb_000771_030

Information

Type -
Description -
Location Contig771: 17173-25458
Sequence    

Annotation

kegg
ID rcu:RCOM_1579740
description kinase, putative
nr
ID XP_012090098.1
description PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID A0A067JRL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25990 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57635: 20013-20876 , PASA_asmbl_57636: 20901-21006 , PASA_asmbl_57640: 22830-25428
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000771_030 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
2 Hb_065230_010 0.0636791559 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
3 Hb_000417_120 0.0734108854 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
4 Hb_131662_010 0.0779074984 - - Insulin-degrading enzyme, putative [Ricinus communis]
5 Hb_000098_250 0.0885704405 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
6 Hb_000598_020 0.1036956927 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
7 Hb_002410_010 0.1041614846 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
8 Hb_168068_010 0.1094010419 - - Disease resistance protein RFL1, putative [Ricinus communis]
9 Hb_000075_110 0.110233221 - - aldo-keto reductase, putative [Ricinus communis]
10 Hb_117127_010 0.1158724238 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
11 Hb_000120_070 0.1171025697 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
12 Hb_165404_010 0.1209248984 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
13 Hb_005087_030 0.121357386 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
14 Hb_002529_080 0.1225195284 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]
15 Hb_010573_040 0.1230889978 - - PREDICTED: zinc-metallopeptidase, peroxisomal isoform X2 [Populus euphratica]
16 Hb_007765_140 0.1236812893 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
17 Hb_003556_070 0.1244158658 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_002276_100 0.1287225537 - - PREDICTED: UDP-glycosyltransferase 89A2-like [Jatropha curcas]
19 Hb_019040_010 0.1319826797 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
20 Hb_008667_030 0.1319986741 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]

Gene co-expression network

sample Hb_000771_030 Hb_000771_030 Hb_065230_010 Hb_065230_010 Hb_000771_030--Hb_065230_010 Hb_000417_120 Hb_000417_120 Hb_000771_030--Hb_000417_120 Hb_131662_010 Hb_131662_010 Hb_000771_030--Hb_131662_010 Hb_000098_250 Hb_000098_250 Hb_000771_030--Hb_000098_250 Hb_000598_020 Hb_000598_020 Hb_000771_030--Hb_000598_020 Hb_002410_010 Hb_002410_010 Hb_000771_030--Hb_002410_010 Hb_065230_010--Hb_131662_010 Hb_065230_010--Hb_002410_010 Hb_065230_010--Hb_000098_250 Hb_065230_010--Hb_000417_120 Hb_020648_020 Hb_020648_020 Hb_065230_010--Hb_020648_020 Hb_000417_120--Hb_000598_020 Hb_000382_030 Hb_000382_030 Hb_000417_120--Hb_000382_030 Hb_000237_070 Hb_000237_070 Hb_000417_120--Hb_000237_070 Hb_000075_110 Hb_000075_110 Hb_000417_120--Hb_000075_110 Hb_000497_100 Hb_000497_100 Hb_131662_010--Hb_000497_100 Hb_005087_030 Hb_005087_030 Hb_131662_010--Hb_005087_030 Hb_010573_040 Hb_010573_040 Hb_131662_010--Hb_010573_040 Hb_000907_120 Hb_000907_120 Hb_131662_010--Hb_000907_120 Hb_000098_250--Hb_002410_010 Hb_117127_010 Hb_117127_010 Hb_000098_250--Hb_117127_010 Hb_008667_030 Hb_008667_030 Hb_000098_250--Hb_008667_030 Hb_002529_080 Hb_002529_080 Hb_000098_250--Hb_002529_080 Hb_000098_250--Hb_020648_020 Hb_000598_020--Hb_000075_110 Hb_000110_030 Hb_000110_030 Hb_000598_020--Hb_000110_030 Hb_165404_010 Hb_165404_010 Hb_000598_020--Hb_165404_010 Hb_005628_050 Hb_005628_050 Hb_000598_020--Hb_005628_050 Hb_002410_010--Hb_020648_020 Hb_000338_030 Hb_000338_030 Hb_002410_010--Hb_000338_030 Hb_002410_010--Hb_117127_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00781128 7.65492 2.9711 3.50561 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0143174 0.0112668 0.0431137 3.79812 0.841545

CAGE analysis