Hb_000598_020

Information

Type -
Description -
Location Contig598: 16943-17548
Sequence    

Annotation

kegg
ID pop:POPTR_0017s05660g
description hypothetical protein
nr
ID XP_012065192.1
description PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L5X1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20871 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000598_020 0.0 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
2 Hb_000417_120 0.0772741326 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
3 Hb_000075_110 0.0895141357 - - aldo-keto reductase, putative [Ricinus communis]
4 Hb_000771_030 0.1036956927 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
5 Hb_000110_030 0.1083476545 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
6 Hb_165404_010 0.1126577921 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
7 Hb_005628_050 0.112761834 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
8 Hb_000046_590 0.1163747871 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
9 Hb_007765_140 0.1201267881 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
10 Hb_000031_160 0.1248157067 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
11 Hb_065230_010 0.1276882287 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
12 Hb_008215_010 0.1313854412 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000552_090 0.1348297334 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
14 Hb_000098_250 0.1397192898 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
15 Hb_075449_040 0.1420467439 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
16 Hb_000120_070 0.1435663866 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
17 Hb_006970_150 0.1456805194 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
18 Hb_000382_030 0.1462520634 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
19 Hb_000237_070 0.1467150916 - - Purple acid phosphatase precursor, putative [Ricinus communis]
20 Hb_131662_010 0.1474129741 - - Insulin-degrading enzyme, putative [Ricinus communis]

Gene co-expression network

sample Hb_000598_020 Hb_000598_020 Hb_000417_120 Hb_000417_120 Hb_000598_020--Hb_000417_120 Hb_000075_110 Hb_000075_110 Hb_000598_020--Hb_000075_110 Hb_000771_030 Hb_000771_030 Hb_000598_020--Hb_000771_030 Hb_000110_030 Hb_000110_030 Hb_000598_020--Hb_000110_030 Hb_165404_010 Hb_165404_010 Hb_000598_020--Hb_165404_010 Hb_005628_050 Hb_005628_050 Hb_000598_020--Hb_005628_050 Hb_000417_120--Hb_000771_030 Hb_065230_010 Hb_065230_010 Hb_000417_120--Hb_065230_010 Hb_000382_030 Hb_000382_030 Hb_000417_120--Hb_000382_030 Hb_000237_070 Hb_000237_070 Hb_000417_120--Hb_000237_070 Hb_000417_120--Hb_000075_110 Hb_000075_110--Hb_165404_010 Hb_007765_140 Hb_007765_140 Hb_000075_110--Hb_007765_140 Hb_000120_070 Hb_000120_070 Hb_000075_110--Hb_000120_070 Hb_008215_010 Hb_008215_010 Hb_000075_110--Hb_008215_010 Hb_006970_150 Hb_006970_150 Hb_000075_110--Hb_006970_150 Hb_000771_030--Hb_065230_010 Hb_131662_010 Hb_131662_010 Hb_000771_030--Hb_131662_010 Hb_000098_250 Hb_000098_250 Hb_000771_030--Hb_000098_250 Hb_002410_010 Hb_002410_010 Hb_000771_030--Hb_002410_010 Hb_004785_160 Hb_004785_160 Hb_000110_030--Hb_004785_160 Hb_010573_040 Hb_010573_040 Hb_000110_030--Hb_010573_040 Hb_000031_160 Hb_000031_160 Hb_000110_030--Hb_000031_160 Hb_001141_210 Hb_001141_210 Hb_000110_030--Hb_001141_210 Hb_177215_020 Hb_177215_020 Hb_000110_030--Hb_177215_020 Hb_165404_010--Hb_007765_140 Hb_165404_010--Hb_065230_010 Hb_165404_010--Hb_008215_010 Hb_075449_040 Hb_075449_040 Hb_165404_010--Hb_075449_040 Hb_165404_010--Hb_000120_070 Hb_005628_050--Hb_000031_160 Hb_001832_240 Hb_001832_240 Hb_005628_050--Hb_001832_240 Hb_005628_050--Hb_000382_030 Hb_001377_130 Hb_001377_130 Hb_005628_050--Hb_001377_130 Hb_005628_050--Hb_000417_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.07329 4.08337 2.52141 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0994952 0 0 3.97409 0.606271

CAGE analysis