Hb_000237_070

Information

Type -
Description -
Location Contig237: 110791-114206
Sequence    

Annotation

kegg
ID rcu:RCOM_1449110
description Purple acid phosphatase precursor, putative (EC:3.1.3.2)
nr
ID XP_002512962.1
description Purple acid phosphatase precursor, putative [Ricinus communis]
swissprot
ID Q9SDZ9
description Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1
trembl
ID B9RHA3
description Purple acid phosphatase OS=Ricinus communis GN=RCOM_1449110 PE=3 SV=1
Gene Ontology
ID GO:0003993
description purple acid phosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24781: 110757-114193
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000237_070 0.0 - - Purple acid phosphatase precursor, putative [Ricinus communis]
2 Hb_031862_020 0.0724513177 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
3 Hb_000382_030 0.0757866246 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
4 Hb_167272_010 0.0816028277 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
5 Hb_005867_030 0.0835578296 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
6 Hb_000318_050 0.0946310625 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
7 Hb_001377_130 0.0967698052 - - PREDICTED: cyclic nucleotide-gated ion channel 1-like [Jatropha curcas]
8 Hb_012098_180 0.0973511331 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
9 Hb_000417_120 0.1010053684 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
10 Hb_001538_050 0.1021898822 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
11 Hb_000085_220 0.1050653372 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003387_080 0.1070677693 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
13 Hb_014361_020 0.1133802765 - - PREDICTED: probable protein phosphatase 2C 78 [Jatropha curcas]
14 Hb_002890_320 0.1136158815 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
15 Hb_006269_010 0.1141910241 - - hypothetical protein JCGZ_21552 [Jatropha curcas]
16 Hb_001515_030 0.1147858743 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_001619_020 0.115701487 - - LRR receptor-like kinase family protein [Medicago truncatula]
18 Hb_004837_110 0.1184094182 - - PREDICTED: MATE efflux family protein 1 isoform X1 [Jatropha curcas]
19 Hb_005463_070 0.1187007385 - - calcium ion binding protein, putative [Ricinus communis]
20 Hb_004166_020 0.1187925728 - - -

Gene co-expression network

sample Hb_000237_070 Hb_000237_070 Hb_031862_020 Hb_031862_020 Hb_000237_070--Hb_031862_020 Hb_000382_030 Hb_000382_030 Hb_000237_070--Hb_000382_030 Hb_167272_010 Hb_167272_010 Hb_000237_070--Hb_167272_010 Hb_005867_030 Hb_005867_030 Hb_000237_070--Hb_005867_030 Hb_000318_050 Hb_000318_050 Hb_000237_070--Hb_000318_050 Hb_001377_130 Hb_001377_130 Hb_000237_070--Hb_001377_130 Hb_031862_020--Hb_167272_010 Hb_000501_040 Hb_000501_040 Hb_031862_020--Hb_000501_040 Hb_000085_220 Hb_000085_220 Hb_031862_020--Hb_000085_220 Hb_031862_020--Hb_000382_030 Hb_007420_010 Hb_007420_010 Hb_031862_020--Hb_007420_010 Hb_000382_030--Hb_001377_130 Hb_000382_030--Hb_000318_050 Hb_000382_030--Hb_000085_220 Hb_001123_170 Hb_001123_170 Hb_000382_030--Hb_001123_170 Hb_001515_030 Hb_001515_030 Hb_167272_010--Hb_001515_030 Hb_167272_010--Hb_007420_010 Hb_009803_030 Hb_009803_030 Hb_167272_010--Hb_009803_030 Hb_167272_010--Hb_000085_220 Hb_005463_070 Hb_005463_070 Hb_005867_030--Hb_005463_070 Hb_001619_020 Hb_001619_020 Hb_005867_030--Hb_001619_020 Hb_003077_060 Hb_003077_060 Hb_005867_030--Hb_003077_060 Hb_000495_050 Hb_000495_050 Hb_005867_030--Hb_000495_050 Hb_005867_030--Hb_000318_050 Hb_000318_050--Hb_005463_070 Hb_003387_080 Hb_003387_080 Hb_000318_050--Hb_003387_080 Hb_001160_020 Hb_001160_020 Hb_000318_050--Hb_001160_020 Hb_005016_080 Hb_005016_080 Hb_000318_050--Hb_005016_080 Hb_002010_100 Hb_002010_100 Hb_000318_050--Hb_002010_100 Hb_001377_130--Hb_001123_170 Hb_001377_130--Hb_000318_050 Hb_005628_050 Hb_005628_050 Hb_001377_130--Hb_005628_050 Hb_001538_050 Hb_001538_050 Hb_001377_130--Hb_001538_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0115989 30.2221 18.871 11.5525 0.0224783 0.0316761
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0263885 0.020762 0 13.0947 9.04206

CAGE analysis