Hb_000495_050

Information

Type -
Description -
Location Contig495: 121716-122153
Sequence    

Annotation

kegg
ID rcu:RCOM_1537780
description hypothetical protein
nr
ID KDP24774.1
description hypothetical protein JCGZ_25174 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZ13
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25174 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45431: 120935-123921 , PASA_asmbl_45432: 120937-123921 , PASA_asmbl_45433: 120937-123921
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000495_050 0.0 - - hypothetical protein JCGZ_25174 [Jatropha curcas]
2 Hb_005814_010 0.0842184606 - - ATP binding protein, putative [Ricinus communis]
3 Hb_002107_110 0.1083867329 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
4 Hb_000454_080 0.1123333948 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
5 Hb_005867_030 0.1128225376 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
6 Hb_000985_140 0.1245814577 - - PREDICTED: uncharacterized protein LOC105643381 isoform X3 [Jatropha curcas]
7 Hb_002030_180 0.1272800482 - - ring finger protein, putative [Ricinus communis]
8 Hb_001619_020 0.1275113541 - - LRR receptor-like kinase family protein [Medicago truncatula]
9 Hb_005463_070 0.1275126525 - - calcium ion binding protein, putative [Ricinus communis]
10 Hb_003077_060 0.133171819 - - PREDICTED: 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like [Jatropha curcas]
11 Hb_000031_160 0.1343925226 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
12 Hb_000359_260 0.1352603377 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
13 Hb_001769_120 0.1411427434 - - PREDICTED: tetratricopeptide repeat protein 7A [Jatropha curcas]
14 Hb_005016_080 0.142033687 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
15 Hb_014361_170 0.1442459249 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
16 Hb_000402_030 0.1454687559 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
17 Hb_002010_100 0.1460188209 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
18 Hb_000552_090 0.1471257421 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
19 Hb_052434_010 0.1475807889 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
20 Hb_000001_010 0.1476655175 - - PREDICTED: uncharacterized protein LOC105648961 [Jatropha curcas]

Gene co-expression network

sample Hb_000495_050 Hb_000495_050 Hb_005814_010 Hb_005814_010 Hb_000495_050--Hb_005814_010 Hb_002107_110 Hb_002107_110 Hb_000495_050--Hb_002107_110 Hb_000454_080 Hb_000454_080 Hb_000495_050--Hb_000454_080 Hb_005867_030 Hb_005867_030 Hb_000495_050--Hb_005867_030 Hb_000985_140 Hb_000985_140 Hb_000495_050--Hb_000985_140 Hb_002030_180 Hb_002030_180 Hb_000495_050--Hb_002030_180 Hb_000771_070 Hb_000771_070 Hb_005814_010--Hb_000771_070 Hb_000031_160 Hb_000031_160 Hb_005814_010--Hb_000031_160 Hb_000402_030 Hb_000402_030 Hb_005814_010--Hb_000402_030 Hb_052434_010 Hb_052434_010 Hb_005814_010--Hb_052434_010 Hb_000552_090 Hb_000552_090 Hb_005814_010--Hb_000552_090 Hb_003077_060 Hb_003077_060 Hb_002107_110--Hb_003077_060 Hb_000359_260 Hb_000359_260 Hb_002107_110--Hb_000359_260 Hb_092458_010 Hb_092458_010 Hb_002107_110--Hb_092458_010 Hb_001635_230 Hb_001635_230 Hb_002107_110--Hb_001635_230 Hb_002615_010 Hb_002615_010 Hb_002107_110--Hb_002615_010 Hb_000071_090 Hb_000071_090 Hb_000454_080--Hb_000071_090 Hb_000836_420 Hb_000836_420 Hb_000454_080--Hb_000836_420 Hb_000454_080--Hb_000985_140 Hb_008406_070 Hb_008406_070 Hb_000454_080--Hb_008406_070 Hb_001769_120 Hb_001769_120 Hb_000454_080--Hb_001769_120 Hb_000237_070 Hb_000237_070 Hb_005867_030--Hb_000237_070 Hb_005463_070 Hb_005463_070 Hb_005867_030--Hb_005463_070 Hb_001619_020 Hb_001619_020 Hb_005867_030--Hb_001619_020 Hb_005867_030--Hb_003077_060 Hb_000318_050 Hb_000318_050 Hb_005867_030--Hb_000318_050 Hb_004393_030 Hb_004393_030 Hb_000985_140--Hb_004393_030 Hb_003078_070 Hb_003078_070 Hb_000985_140--Hb_003078_070 Hb_021254_020 Hb_021254_020 Hb_000985_140--Hb_021254_020 Hb_001247_160 Hb_001247_160 Hb_000985_140--Hb_001247_160 Hb_000032_090 Hb_000032_090 Hb_000985_140--Hb_000032_090 Hb_000985_140--Hb_000071_090 Hb_043987_010 Hb_043987_010 Hb_002030_180--Hb_043987_010 Hb_002030_180--Hb_005814_010 Hb_002030_180--Hb_000031_160 Hb_002477_100 Hb_002477_100 Hb_002030_180--Hb_002477_100 Hb_000009_150 Hb_000009_150 Hb_002030_180--Hb_000009_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.09567 102.166 107.239 39.1049 0 0.570395
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.03133 3.04237 0.869144 32.9409 25.8283

CAGE analysis