Hb_005814_010

Information

Type -
Description -
Location Contig5814: 141-2790
Sequence    

Annotation

kegg
ID rcu:RCOM_0519620
description ATP binding protein, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002528777.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID C0LGG9
description Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=2 SV=2
trembl
ID B9SS08
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_0519620 PE=4 SV=1
Gene Ontology
ID GO:0004674
description probable lrr receptor-like serine threonine-protein kinase at1g07650 isoform x4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005814_010 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_000495_050 0.0842184606 - - hypothetical protein JCGZ_25174 [Jatropha curcas]
3 Hb_000771_070 0.1072310561 - - PREDICTED: plastidial pyruvate kinase 4, chloroplastic [Jatropha curcas]
4 Hb_000031_160 0.1116906564 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
5 Hb_000402_030 0.1130908255 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
6 Hb_052434_010 0.1152593159 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
7 Hb_000552_090 0.117188627 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
8 Hb_002030_180 0.1193882053 - - ring finger protein, putative [Ricinus communis]
9 Hb_000027_130 0.1197752568 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
10 Hb_025236_020 0.1205400944 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
11 Hb_005375_070 0.1280448022 transcription factor TF Family: MYB-related PREDICTED: protein LHY [Jatropha curcas]
12 Hb_002343_020 0.1280981274 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]
13 Hb_001898_010 0.1308407406 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
14 Hb_003529_230 0.1330952423 transcription factor TF Family: ERF -
15 Hb_001619_020 0.1344076584 - - LRR receptor-like kinase family protein [Medicago truncatula]
16 Hb_012098_180 0.1345960769 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
17 Hb_002107_110 0.1355690163 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
18 Hb_000752_020 0.1359522206 - - PREDICTED: uncharacterized protein LOC105641803 isoform X1 [Jatropha curcas]
19 Hb_005867_030 0.1381137329 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
20 Hb_005628_050 0.1458976623 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005814_010 Hb_005814_010 Hb_000495_050 Hb_000495_050 Hb_005814_010--Hb_000495_050 Hb_000771_070 Hb_000771_070 Hb_005814_010--Hb_000771_070 Hb_000031_160 Hb_000031_160 Hb_005814_010--Hb_000031_160 Hb_000402_030 Hb_000402_030 Hb_005814_010--Hb_000402_030 Hb_052434_010 Hb_052434_010 Hb_005814_010--Hb_052434_010 Hb_000552_090 Hb_000552_090 Hb_005814_010--Hb_000552_090 Hb_002107_110 Hb_002107_110 Hb_000495_050--Hb_002107_110 Hb_000454_080 Hb_000454_080 Hb_000495_050--Hb_000454_080 Hb_005867_030 Hb_005867_030 Hb_000495_050--Hb_005867_030 Hb_000985_140 Hb_000985_140 Hb_000495_050--Hb_000985_140 Hb_002030_180 Hb_002030_180 Hb_000495_050--Hb_002030_180 Hb_000027_130 Hb_000027_130 Hb_000771_070--Hb_000027_130 Hb_000752_020 Hb_000752_020 Hb_000771_070--Hb_000752_020 Hb_003529_230 Hb_003529_230 Hb_000771_070--Hb_003529_230 Hb_000771_070--Hb_000402_030 Hb_025236_020 Hb_025236_020 Hb_000771_070--Hb_025236_020 Hb_001619_020 Hb_001619_020 Hb_000031_160--Hb_001619_020 Hb_005628_050 Hb_005628_050 Hb_000031_160--Hb_005628_050 Hb_001141_210 Hb_001141_210 Hb_000031_160--Hb_001141_210 Hb_004785_160 Hb_004785_160 Hb_000031_160--Hb_004785_160 Hb_001635_230 Hb_001635_230 Hb_000031_160--Hb_001635_230 Hb_002343_020 Hb_002343_020 Hb_000402_030--Hb_002343_020 Hb_005375_070 Hb_005375_070 Hb_000402_030--Hb_005375_070 Hb_001898_010 Hb_001898_010 Hb_000402_030--Hb_001898_010 Hb_149484_010 Hb_149484_010 Hb_000402_030--Hb_149484_010 Hb_007574_050 Hb_007574_050 Hb_000402_030--Hb_007574_050 Hb_052434_010--Hb_003529_230 Hb_052434_010--Hb_025236_020 Hb_000359_260 Hb_000359_260 Hb_052434_010--Hb_000359_260 Hb_000001_010 Hb_000001_010 Hb_052434_010--Hb_000001_010 Hb_052434_010--Hb_002107_110 Hb_000552_090--Hb_000031_160 Hb_000552_090--Hb_001635_230 Hb_002615_010 Hb_002615_010 Hb_000552_090--Hb_002615_010 Hb_000598_020 Hb_000598_020 Hb_000552_090--Hb_000598_020 Hb_002471_190 Hb_002471_190 Hb_000552_090--Hb_002471_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.916891 42.7112 32.1251 13.3529 0.125089 0.603317
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.3851 0.706762 0.659567 13.5028 6.66707

CAGE analysis