Hb_000552_090

Information

Type -
Description -
Location Contig552: 77650-80180
Sequence    

Annotation

kegg
ID pxb:103942478
description nudix hydrolase 2-like
nr
ID KDP29942.1
description hypothetical protein JCGZ_18511 [Jatropha curcas]
swissprot
ID Q9SU14
description Nudix hydrolase 7 OS=Arabidopsis thaliana GN=NUDT7 PE=1 SV=1
trembl
ID A0A067K1D4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18511 PE=3 SV=1
Gene Ontology
ID GO:0000210
description nudix hydrolase 2-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48295: 77701-78314 , PASA_asmbl_48296: 80722-82065
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000552_090 0.0 - - hypothetical protein JCGZ_18511 [Jatropha curcas]
2 Hb_005814_010 0.117188627 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000031_160 0.1256970497 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
4 Hb_001635_230 0.1280050213 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
5 Hb_002615_010 0.1336540683 - - Uncharacterized protein TCM_040942 [Theobroma cacao]
6 Hb_000598_020 0.1348297334 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
7 Hb_002471_190 0.1421262455 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
8 Hb_000495_050 0.1471257421 - - hypothetical protein JCGZ_25174 [Jatropha curcas]
9 Hb_005628_050 0.1490208106 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
10 Hb_001619_020 0.1499371724 - - LRR receptor-like kinase family protein [Medicago truncatula]
11 Hb_005357_270 0.1504666097 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
12 Hb_000110_030 0.1515109278 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
13 Hb_002107_110 0.1528353613 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
14 Hb_005867_030 0.1585611403 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
15 Hb_154466_010 0.1620519286 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
16 Hb_000359_260 0.1621275103 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
17 Hb_042098_010 0.1631569598 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
18 Hb_001141_210 0.1652431908 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
19 Hb_003077_060 0.1656255211 - - PREDICTED: 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like [Jatropha curcas]
20 Hb_000001_010 0.1667784856 - - PREDICTED: uncharacterized protein LOC105648961 [Jatropha curcas]

Gene co-expression network

sample Hb_000552_090 Hb_000552_090 Hb_005814_010 Hb_005814_010 Hb_000552_090--Hb_005814_010 Hb_000031_160 Hb_000031_160 Hb_000552_090--Hb_000031_160 Hb_001635_230 Hb_001635_230 Hb_000552_090--Hb_001635_230 Hb_002615_010 Hb_002615_010 Hb_000552_090--Hb_002615_010 Hb_000598_020 Hb_000598_020 Hb_000552_090--Hb_000598_020 Hb_002471_190 Hb_002471_190 Hb_000552_090--Hb_002471_190 Hb_000495_050 Hb_000495_050 Hb_005814_010--Hb_000495_050 Hb_000771_070 Hb_000771_070 Hb_005814_010--Hb_000771_070 Hb_005814_010--Hb_000031_160 Hb_000402_030 Hb_000402_030 Hb_005814_010--Hb_000402_030 Hb_052434_010 Hb_052434_010 Hb_005814_010--Hb_052434_010 Hb_001619_020 Hb_001619_020 Hb_000031_160--Hb_001619_020 Hb_005628_050 Hb_005628_050 Hb_000031_160--Hb_005628_050 Hb_001141_210 Hb_001141_210 Hb_000031_160--Hb_001141_210 Hb_004785_160 Hb_004785_160 Hb_000031_160--Hb_004785_160 Hb_000031_160--Hb_001635_230 Hb_001635_230--Hb_002615_010 Hb_001635_230--Hb_002471_190 Hb_017693_040 Hb_017693_040 Hb_001635_230--Hb_017693_040 Hb_000359_260 Hb_000359_260 Hb_001635_230--Hb_000359_260 Hb_001635_230--Hb_001619_020 Hb_158111_010 Hb_158111_010 Hb_001635_230--Hb_158111_010 Hb_002615_010--Hb_002471_190 Hb_002107_110 Hb_002107_110 Hb_002615_010--Hb_002107_110 Hb_002615_010--Hb_158111_010 Hb_002391_020 Hb_002391_020 Hb_002615_010--Hb_002391_020 Hb_002010_020 Hb_002010_020 Hb_002615_010--Hb_002010_020 Hb_000417_120 Hb_000417_120 Hb_000598_020--Hb_000417_120 Hb_000075_110 Hb_000075_110 Hb_000598_020--Hb_000075_110 Hb_000771_030 Hb_000771_030 Hb_000598_020--Hb_000771_030 Hb_000110_030 Hb_000110_030 Hb_000598_020--Hb_000110_030 Hb_165404_010 Hb_165404_010 Hb_000598_020--Hb_165404_010 Hb_000598_020--Hb_005628_050 Hb_154466_010 Hb_154466_010 Hb_002471_190--Hb_154466_010 Hb_002471_190--Hb_002010_020 Hb_000087_200 Hb_000087_200 Hb_002471_190--Hb_000087_200 Hb_004109_240 Hb_004109_240 Hb_002471_190--Hb_004109_240 Hb_002471_190--Hb_158111_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0476292 3.99067 2.97776 1.17214 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.221739 0 0 1.32721 0.333687

CAGE analysis