Hb_017693_040

Information

Type -
Description -
Location Contig17693: 39746-43620
Sequence    

Annotation

kegg
ID mtr:MTR_1g110220
description Receptor-like kinase
nr
ID AES62872.2
description tyrosine kinase family protein [Medicago truncatula]
swissprot
ID -
description -
trembl
ID G7IC85
description Tyrosine kinase family protein OS=Medicago truncatula GN=MTR_1g110220 PE=4 SV=2
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017693_040 0.0 - - tyrosine kinase family protein [Medicago truncatula]
2 Hb_077694_010 0.07477388 - - uncharacterized protein LOC100305624 [Glycine max]
3 Hb_121540_010 0.0964044123 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
4 Hb_000087_200 0.0976528059 - - PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]
5 Hb_001635_230 0.1009492987 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_000359_260 0.1066124746 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
7 Hb_012022_020 0.1086906106 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
8 Hb_028486_010 0.1092662572 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
9 Hb_000069_530 0.1124990906 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
10 Hb_120011_010 0.116044153 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
11 Hb_001846_030 0.1167490627 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
12 Hb_074672_010 0.1209252897 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_004109_240 0.1215629469 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
14 Hb_001619_140 0.1241197501 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
15 Hb_002471_190 0.1243925679 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
16 Hb_154466_010 0.125630942 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
17 Hb_160653_010 0.1259434899 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
18 Hb_158111_010 0.1275370606 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]
19 Hb_002010_020 0.1286516071 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
20 Hb_008948_070 0.1302404859 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_017693_040 Hb_017693_040 Hb_077694_010 Hb_077694_010 Hb_017693_040--Hb_077694_010 Hb_121540_010 Hb_121540_010 Hb_017693_040--Hb_121540_010 Hb_000087_200 Hb_000087_200 Hb_017693_040--Hb_000087_200 Hb_001635_230 Hb_001635_230 Hb_017693_040--Hb_001635_230 Hb_000359_260 Hb_000359_260 Hb_017693_040--Hb_000359_260 Hb_012022_020 Hb_012022_020 Hb_017693_040--Hb_012022_020 Hb_077694_010--Hb_121540_010 Hb_005381_010 Hb_005381_010 Hb_077694_010--Hb_005381_010 Hb_000069_530 Hb_000069_530 Hb_077694_010--Hb_000069_530 Hb_001660_080 Hb_001660_080 Hb_077694_010--Hb_001660_080 Hb_120011_010 Hb_120011_010 Hb_077694_010--Hb_120011_010 Hb_003060_150 Hb_003060_150 Hb_121540_010--Hb_003060_150 Hb_121540_010--Hb_005381_010 Hb_121540_010--Hb_000069_530 Hb_028486_010 Hb_028486_010 Hb_121540_010--Hb_028486_010 Hb_121540_010--Hb_001660_080 Hb_000087_200--Hb_028486_010 Hb_004109_240 Hb_004109_240 Hb_000087_200--Hb_004109_240 Hb_002471_190 Hb_002471_190 Hb_000087_200--Hb_002471_190 Hb_000087_200--Hb_121540_010 Hb_021254_020 Hb_021254_020 Hb_000087_200--Hb_021254_020 Hb_002615_010 Hb_002615_010 Hb_001635_230--Hb_002615_010 Hb_001635_230--Hb_002471_190 Hb_001635_230--Hb_000359_260 Hb_001619_020 Hb_001619_020 Hb_001635_230--Hb_001619_020 Hb_158111_010 Hb_158111_010 Hb_001635_230--Hb_158111_010 Hb_002107_110 Hb_002107_110 Hb_000359_260--Hb_002107_110 Hb_154466_010 Hb_154466_010 Hb_000359_260--Hb_154466_010 Hb_000359_260--Hb_077694_010 Hb_002010_020 Hb_002010_020 Hb_000359_260--Hb_002010_020 Hb_001846_030 Hb_001846_030 Hb_012022_020--Hb_001846_030 Hb_012022_020--Hb_000069_530 Hb_032071_010 Hb_032071_010 Hb_012022_020--Hb_032071_010 Hb_012022_020--Hb_120011_010 Hb_012022_020--Hb_077694_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.72972 1.8656 0.572195 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.221954 0.109714

CAGE analysis