Hb_120011_010

Information

Type -
Description -
Location Contig120011: 507-1669
Sequence    

Annotation

kegg
ID pop:POPTR_0017s06310g
description hypothetical protein
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0004714
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120011_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_074672_010 0.0852620389 - - receptor serine/threonine kinase, putative [Ricinus communis]
3 Hb_001619_140 0.0885216069 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
4 Hb_001310_010 0.0966274117 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type [Jatropha curcas]
5 Hb_077694_010 0.1036973673 - - uncharacterized protein LOC100305624 [Glycine max]
6 Hb_008202_020 0.1115061732 - - receptor serine/threonine kinase, putative [Ricinus communis]
7 Hb_006615_060 0.112051089 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000959_240 0.113655811 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
9 Hb_017693_040 0.116044153 - - tyrosine kinase family protein [Medicago truncatula]
10 Hb_012022_020 0.1197633123 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
11 Hb_004612_020 0.1199373149 - - PREDICTED: tetraspanin-8-like [Populus euphratica]
12 Hb_005054_330 0.1205458139 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
13 Hb_001153_250 0.121121756 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1A-like [Jatropha curcas]
14 Hb_007858_020 0.1211561074 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
15 Hb_154466_010 0.1228061231 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
16 Hb_121540_010 0.1242148362 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
17 Hb_000172_410 0.1247049386 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_005381_010 0.1249376216 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
19 Hb_001999_170 0.1249830079 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
20 Hb_004899_010 0.1249999075 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]

Gene co-expression network

sample Hb_120011_010 Hb_120011_010 Hb_074672_010 Hb_074672_010 Hb_120011_010--Hb_074672_010 Hb_001619_140 Hb_001619_140 Hb_120011_010--Hb_001619_140 Hb_001310_010 Hb_001310_010 Hb_120011_010--Hb_001310_010 Hb_077694_010 Hb_077694_010 Hb_120011_010--Hb_077694_010 Hb_008202_020 Hb_008202_020 Hb_120011_010--Hb_008202_020 Hb_006615_060 Hb_006615_060 Hb_120011_010--Hb_006615_060 Hb_074672_010--Hb_077694_010 Hb_074672_010--Hb_006615_060 Hb_000959_240 Hb_000959_240 Hb_074672_010--Hb_000959_240 Hb_017693_040 Hb_017693_040 Hb_074672_010--Hb_017693_040 Hb_074672_010--Hb_001619_140 Hb_001619_140--Hb_008202_020 Hb_154466_010 Hb_154466_010 Hb_001619_140--Hb_154466_010 Hb_000571_030 Hb_000571_030 Hb_001619_140--Hb_000571_030 Hb_004899_360 Hb_004899_360 Hb_001619_140--Hb_004899_360 Hb_007858_020 Hb_007858_020 Hb_001619_140--Hb_007858_020 Hb_001999_170 Hb_001999_170 Hb_001310_010--Hb_001999_170 Hb_002960_100 Hb_002960_100 Hb_001310_010--Hb_002960_100 Hb_004612_020 Hb_004612_020 Hb_001310_010--Hb_004612_020 Hb_164146_020 Hb_164146_020 Hb_001310_010--Hb_164146_020 Hb_010964_010 Hb_010964_010 Hb_001310_010--Hb_010964_010 Hb_121540_010 Hb_121540_010 Hb_077694_010--Hb_121540_010 Hb_077694_010--Hb_017693_040 Hb_005381_010 Hb_005381_010 Hb_077694_010--Hb_005381_010 Hb_000069_530 Hb_000069_530 Hb_077694_010--Hb_000069_530 Hb_001660_080 Hb_001660_080 Hb_077694_010--Hb_001660_080 Hb_008202_020--Hb_004899_360 Hb_002010_020 Hb_002010_020 Hb_008202_020--Hb_002010_020 Hb_004109_240 Hb_004109_240 Hb_008202_020--Hb_004109_240 Hb_008202_020--Hb_154466_010 Hb_008202_020--Hb_121540_010 Hb_006615_060--Hb_164146_020 Hb_001153_250 Hb_001153_250 Hb_006615_060--Hb_001153_250 Hb_006615_060--Hb_005381_010 Hb_006615_060--Hb_077694_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0441438 14.5848 12.897 2.83 0.0206882 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.151651 0.0397577 0 0.639504 0.894807

CAGE analysis