Hb_077694_010

Information

Type -
Description -
Location Contig77694: 8984-9545
Sequence    

Annotation

kegg
ID gmx:100305624
description uncharacterized LOC100305624
nr
ID NP_001238130.1
description uncharacterized protein LOC100305624 [Glycine max]
swissprot
ID -
description -
trembl
ID C6SVY1
description Putative uncharacterized protein OS=Glycine max PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57848: 9068-10048 , PASA_asmbl_57849: 10405-10773
cDNA
(Sanger)
(ID:Location)		 037_C20r.ab1: 9357-10048

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_077694_010 0.0 - - uncharacterized protein LOC100305624 [Glycine max]
2 Hb_121540_010 0.0742076844 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
3 Hb_017693_040 0.07477388 - - tyrosine kinase family protein [Medicago truncatula]
4 Hb_005381_010 0.0927281165 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
5 Hb_000069_530 0.0928905245 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
6 Hb_001660_080 0.0986680199 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
7 Hb_120011_010 0.1036973673 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_086614_010 0.1043766715 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X1 [Jatropha curcas]
9 Hb_074672_010 0.1052239535 - - receptor serine/threonine kinase, putative [Ricinus communis]
10 Hb_006615_060 0.1091943847 - - conserved hypothetical protein [Ricinus communis]
11 Hb_008202_020 0.1136041594 - - receptor serine/threonine kinase, putative [Ricinus communis]
12 Hb_000836_420 0.1174753146 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_003060_150 0.1187597068 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_000359_260 0.1243203703 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
15 Hb_012022_020 0.1251705385 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
16 Hb_028486_010 0.1279753645 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
17 Hb_000172_410 0.1306309704 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_018633_010 0.1307462303 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
19 Hb_001619_140 0.1325418895 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_004109_240 0.1325862859 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_077694_010 Hb_077694_010 Hb_121540_010 Hb_121540_010 Hb_077694_010--Hb_121540_010 Hb_017693_040 Hb_017693_040 Hb_077694_010--Hb_017693_040 Hb_005381_010 Hb_005381_010 Hb_077694_010--Hb_005381_010 Hb_000069_530 Hb_000069_530 Hb_077694_010--Hb_000069_530 Hb_001660_080 Hb_001660_080 Hb_077694_010--Hb_001660_080 Hb_120011_010 Hb_120011_010 Hb_077694_010--Hb_120011_010 Hb_003060_150 Hb_003060_150 Hb_121540_010--Hb_003060_150 Hb_121540_010--Hb_005381_010 Hb_121540_010--Hb_000069_530 Hb_028486_010 Hb_028486_010 Hb_121540_010--Hb_028486_010 Hb_121540_010--Hb_001660_080 Hb_017693_040--Hb_121540_010 Hb_000087_200 Hb_000087_200 Hb_017693_040--Hb_000087_200 Hb_001635_230 Hb_001635_230 Hb_017693_040--Hb_001635_230 Hb_000359_260 Hb_000359_260 Hb_017693_040--Hb_000359_260 Hb_012022_020 Hb_012022_020 Hb_017693_040--Hb_012022_020 Hb_005381_010--Hb_000069_530 Hb_005381_010--Hb_003060_150 Hb_182167_010 Hb_182167_010 Hb_005381_010--Hb_182167_010 Hb_005381_010--Hb_001660_080 Hb_000069_530--Hb_003060_150 Hb_000592_070 Hb_000592_070 Hb_000069_530--Hb_000592_070 Hb_000069_530--Hb_001660_080 Hb_000836_420 Hb_000836_420 Hb_001660_080--Hb_000836_420 Hb_001660_080--Hb_003060_150 Hb_000035_140 Hb_000035_140 Hb_001660_080--Hb_000035_140 Hb_189208_060 Hb_189208_060 Hb_001660_080--Hb_189208_060 Hb_074672_010 Hb_074672_010 Hb_120011_010--Hb_074672_010 Hb_001619_140 Hb_001619_140 Hb_120011_010--Hb_001619_140 Hb_001310_010 Hb_001310_010 Hb_120011_010--Hb_001310_010 Hb_008202_020 Hb_008202_020 Hb_120011_010--Hb_008202_020 Hb_006615_060 Hb_006615_060 Hb_120011_010--Hb_006615_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 19.8065 24.164 5.63633 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.54648 2.40712

CAGE analysis