Hb_004109_240

Information

Type -
Description -
Location Contig4109: 240319-248719
Sequence    

Annotation

kegg
ID rcu:RCOM_0565090
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID XP_012065734.1
description PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
swissprot
ID C0LGH3
description Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=2 SV=2
trembl
ID A0A067L4K9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26556 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40662: 240187-242905
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004109_240 0.0 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
2 Hb_021254_020 0.0706620167 - - calmodulin binding protein, putative [Ricinus communis]
3 Hb_000087_200 0.0724317867 - - PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]
4 Hb_028486_010 0.0770229906 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
5 Hb_004899_360 0.0881715733 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
6 Hb_008202_020 0.0922351216 - - receptor serine/threonine kinase, putative [Ricinus communis]
7 Hb_121540_010 0.0964029629 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
8 Hb_000172_410 0.0979062121 - - metal ion binding protein, putative [Ricinus communis]
9 Hb_001619_140 0.0982776599 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
10 Hb_008810_030 0.0993012199 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
11 Hb_154466_010 0.1038034777 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
12 Hb_002471_190 0.1043768423 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
13 Hb_004393_030 0.1087639309 - - CBL-interacting protein kinase 6 [Populus trichocarpa]
14 Hb_000836_420 0.109121591 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
15 Hb_000985_140 0.1096682173 - - PREDICTED: uncharacterized protein LOC105643381 isoform X3 [Jatropha curcas]
16 Hb_002010_020 0.1164667367 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
17 Hb_003078_070 0.1205753615 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g25290 [Jatropha curcas]
18 Hb_017693_040 0.1215629469 - - tyrosine kinase family protein [Medicago truncatula]
19 Hb_001247_160 0.1259658915 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
20 Hb_077694_010 0.1325862859 - - uncharacterized protein LOC100305624 [Glycine max]

Gene co-expression network

sample Hb_004109_240 Hb_004109_240 Hb_021254_020 Hb_021254_020 Hb_004109_240--Hb_021254_020 Hb_000087_200 Hb_000087_200 Hb_004109_240--Hb_000087_200 Hb_028486_010 Hb_028486_010 Hb_004109_240--Hb_028486_010 Hb_004899_360 Hb_004899_360 Hb_004109_240--Hb_004899_360 Hb_008202_020 Hb_008202_020 Hb_004109_240--Hb_008202_020 Hb_121540_010 Hb_121540_010 Hb_004109_240--Hb_121540_010 Hb_004393_030 Hb_004393_030 Hb_021254_020--Hb_004393_030 Hb_008810_030 Hb_008810_030 Hb_021254_020--Hb_008810_030 Hb_003078_070 Hb_003078_070 Hb_021254_020--Hb_003078_070 Hb_000985_140 Hb_000985_140 Hb_021254_020--Hb_000985_140 Hb_001660_130 Hb_001660_130 Hb_021254_020--Hb_001660_130 Hb_000087_200--Hb_028486_010 Hb_002471_190 Hb_002471_190 Hb_000087_200--Hb_002471_190 Hb_017693_040 Hb_017693_040 Hb_000087_200--Hb_017693_040 Hb_000087_200--Hb_121540_010 Hb_000087_200--Hb_021254_020 Hb_028486_010--Hb_121540_010 Hb_003060_150 Hb_003060_150 Hb_028486_010--Hb_003060_150 Hb_028486_010--Hb_021254_020 Hb_160653_010 Hb_160653_010 Hb_028486_010--Hb_160653_010 Hb_004899_360--Hb_008202_020 Hb_004899_360--Hb_008810_030 Hb_097007_020 Hb_097007_020 Hb_004899_360--Hb_097007_020 Hb_001619_140 Hb_001619_140 Hb_004899_360--Hb_001619_140 Hb_002010_020 Hb_002010_020 Hb_004899_360--Hb_002010_020 Hb_008202_020--Hb_001619_140 Hb_008202_020--Hb_002010_020 Hb_154466_010 Hb_154466_010 Hb_008202_020--Hb_154466_010 Hb_008202_020--Hb_121540_010 Hb_121540_010--Hb_003060_150 Hb_005381_010 Hb_005381_010 Hb_121540_010--Hb_005381_010 Hb_000069_530 Hb_000069_530 Hb_121540_010--Hb_000069_530 Hb_077694_010 Hb_077694_010 Hb_121540_010--Hb_077694_010 Hb_001660_080 Hb_001660_080 Hb_121540_010--Hb_001660_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0141497 44.8306 32.2399 15.8592 0.0283566 0.0533157
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.225706 0.126833 0 4.03144 5.93663

CAGE analysis