Hb_160653_010

Information

Type -
Description -
Location Contig160653: 137-1012
Sequence    

Annotation

kegg
ID tcc:TCM_005833
description LRR and NB-ARC domains-containing disease resistance protein, putative
nr
ID XP_012065632.1
description PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
swissprot
ID Q9LRR5
description Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1
trembl
ID A0A067LGA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16887 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_160653_010 0.0 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
2 Hb_028486_010 0.1014906312 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
3 Hb_001430_010 0.1020695132 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
4 Hb_003060_150 0.1038275958 - - UDP-glucosyltransferase, putative [Ricinus communis]
5 Hb_001369_670 0.1093445511 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
6 Hb_001160_050 0.1103841907 - - PREDICTED: long-chain-alcohol oxidase FAO1 [Jatropha curcas]
7 Hb_070634_010 0.1130028383 - - TMV resistance protein N, putative [Ricinus communis]
8 Hb_000836_420 0.1178692645 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_000771_040 0.1179720061 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Jatropha curcas]
10 Hb_121540_010 0.1181149079 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
11 Hb_000087_200 0.1184966691 - - PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]
12 Hb_011915_020 0.1245308073 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
13 Hb_000069_530 0.1246038261 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
14 Hb_002374_030 0.1250429742 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
15 Hb_017693_040 0.1259434899 - - tyrosine kinase family protein [Medicago truncatula]
16 Hb_023386_060 0.1275529036 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
17 Hb_010721_010 0.1278903229 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
18 Hb_015037_010 0.1316127697 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
19 Hb_001971_030 0.1326420653 - - PREDICTED: exonuclease 1 [Jatropha curcas]
20 Hb_006873_010 0.1343020735 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]

Gene co-expression network

sample Hb_160653_010 Hb_160653_010 Hb_028486_010 Hb_028486_010 Hb_160653_010--Hb_028486_010 Hb_001430_010 Hb_001430_010 Hb_160653_010--Hb_001430_010 Hb_003060_150 Hb_003060_150 Hb_160653_010--Hb_003060_150 Hb_001369_670 Hb_001369_670 Hb_160653_010--Hb_001369_670 Hb_001160_050 Hb_001160_050 Hb_160653_010--Hb_001160_050 Hb_070634_010 Hb_070634_010 Hb_160653_010--Hb_070634_010 Hb_000087_200 Hb_000087_200 Hb_028486_010--Hb_000087_200 Hb_121540_010 Hb_121540_010 Hb_028486_010--Hb_121540_010 Hb_004109_240 Hb_004109_240 Hb_028486_010--Hb_004109_240 Hb_028486_010--Hb_003060_150 Hb_021254_020 Hb_021254_020 Hb_028486_010--Hb_021254_020 Hb_010721_010 Hb_010721_010 Hb_001430_010--Hb_010721_010 Hb_015037_010 Hb_015037_010 Hb_001430_010--Hb_015037_010 Hb_011915_020 Hb_011915_020 Hb_001430_010--Hb_011915_020 Hb_023386_060 Hb_023386_060 Hb_001430_010--Hb_023386_060 Hb_002048_100 Hb_002048_100 Hb_001430_010--Hb_002048_100 Hb_000069_530 Hb_000069_530 Hb_003060_150--Hb_000069_530 Hb_003060_150--Hb_121540_010 Hb_005381_010 Hb_005381_010 Hb_003060_150--Hb_005381_010 Hb_001660_080 Hb_001660_080 Hb_003060_150--Hb_001660_080 Hb_009252_090 Hb_009252_090 Hb_003060_150--Hb_009252_090 Hb_000172_410 Hb_000172_410 Hb_001369_670--Hb_000172_410 Hb_003078_070 Hb_003078_070 Hb_001369_670--Hb_003078_070 Hb_001369_670--Hb_003060_150 Hb_004837_200 Hb_004837_200 Hb_001369_670--Hb_004837_200 Hb_001369_670--Hb_121540_010 Hb_000836_420 Hb_000836_420 Hb_001160_050--Hb_000836_420 Hb_002374_030 Hb_002374_030 Hb_001160_050--Hb_002374_030 Hb_000878_090 Hb_000878_090 Hb_001160_050--Hb_000878_090 Hb_189208_060 Hb_189208_060 Hb_001160_050--Hb_189208_060 Hb_009907_020 Hb_009907_020 Hb_001160_050--Hb_009907_020 Hb_000152_410 Hb_000152_410 Hb_001160_050--Hb_000152_410 Hb_138086_010 Hb_138086_010 Hb_070634_010--Hb_138086_010 Hb_008806_040 Hb_008806_040 Hb_070634_010--Hb_008806_040 Hb_002676_110 Hb_002676_110 Hb_070634_010--Hb_002676_110 Hb_070634_010--Hb_001430_010 Hb_070634_010--Hb_010721_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0487899 2.96541 4.10455 2.16267 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.40492 0.341052

CAGE analysis