Hb_001430_010

Information

Type -
Description -
Location Contig1430: 247-18190
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_012073127.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at1g34110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11351: 14909-15554 , PASA_asmbl_11352: 15577-15970 , PASA_asmbl_11353: 15974-16547 , PASA_asmbl_11354: 16595-16868 , PASA_asmbl_11355: 16880-17133 , PASA_asmbl_11356: 17145-18276
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001430_010 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
2 Hb_160653_010 0.1020695132 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
3 Hb_010721_010 0.1023778829 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
4 Hb_015037_010 0.1091750412 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
5 Hb_011915_020 0.1110470548 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
6 Hb_023386_060 0.1126495439 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
7 Hb_002048_100 0.1163747021 - - PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Jatropha curcas]
8 Hb_070634_010 0.1165299318 - - TMV resistance protein N, putative [Ricinus communis]
9 Hb_007904_290 0.1200883276 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
10 Hb_008406_070 0.1255371148 - - PREDICTED: probable protein phosphatase 2C 58 [Jatropha curcas]
11 Hb_001369_670 0.1261146056 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
12 Hb_002374_030 0.1349432291 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
13 Hb_000071_090 0.1362129611 - - PREDICTED: probable protein phosphatase 2C 4 [Jatropha curcas]
14 Hb_006873_010 0.1362411864 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
15 Hb_076771_010 0.1365976179 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
16 Hb_002048_070 0.1376759862 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
17 Hb_011028_040 0.1377600445 - - receptor serine/threonine kinase, putative [Ricinus communis]
18 Hb_138086_010 0.1424350694 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
19 Hb_004712_090 0.1473175725 - - Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis]
20 Hb_004970_070 0.1476445046 - - hypothetical protein POPTR_0002s12620g [Populus trichocarpa]

Gene co-expression network

sample Hb_001430_010 Hb_001430_010 Hb_160653_010 Hb_160653_010 Hb_001430_010--Hb_160653_010 Hb_010721_010 Hb_010721_010 Hb_001430_010--Hb_010721_010 Hb_015037_010 Hb_015037_010 Hb_001430_010--Hb_015037_010 Hb_011915_020 Hb_011915_020 Hb_001430_010--Hb_011915_020 Hb_023386_060 Hb_023386_060 Hb_001430_010--Hb_023386_060 Hb_002048_100 Hb_002048_100 Hb_001430_010--Hb_002048_100 Hb_028486_010 Hb_028486_010 Hb_160653_010--Hb_028486_010 Hb_003060_150 Hb_003060_150 Hb_160653_010--Hb_003060_150 Hb_001369_670 Hb_001369_670 Hb_160653_010--Hb_001369_670 Hb_001160_050 Hb_001160_050 Hb_160653_010--Hb_001160_050 Hb_070634_010 Hb_070634_010 Hb_160653_010--Hb_070634_010 Hb_010721_010--Hb_023386_060 Hb_002048_070 Hb_002048_070 Hb_010721_010--Hb_002048_070 Hb_002676_110 Hb_002676_110 Hb_010721_010--Hb_002676_110 Hb_010721_010--Hb_011915_020 Hb_001663_090 Hb_001663_090 Hb_010721_010--Hb_001663_090 Hb_002200_020 Hb_002200_020 Hb_015037_010--Hb_002200_020 Hb_015037_010--Hb_070634_010 Hb_000392_170 Hb_000392_170 Hb_015037_010--Hb_000392_170 Hb_008806_040 Hb_008806_040 Hb_015037_010--Hb_008806_040 Hb_006873_010 Hb_006873_010 Hb_015037_010--Hb_006873_010 Hb_001610_070 Hb_001610_070 Hb_011915_020--Hb_001610_070 Hb_002374_030 Hb_002374_030 Hb_011915_020--Hb_002374_030 Hb_029622_090 Hb_029622_090 Hb_011915_020--Hb_029622_090 Hb_001198_160 Hb_001198_160 Hb_011915_020--Hb_001198_160 Hb_011915_020--Hb_002048_070 Hb_023386_060--Hb_002048_070 Hb_000465_350 Hb_000465_350 Hb_023386_060--Hb_000465_350 Hb_023386_060--Hb_011915_020 Hb_023386_060--Hb_001663_090 Hb_004970_070 Hb_004970_070 Hb_002048_100--Hb_004970_070 Hb_002133_010 Hb_002133_010 Hb_002048_100--Hb_002133_010 Hb_031266_020 Hb_031266_020 Hb_002048_100--Hb_031266_020 Hb_003119_040 Hb_003119_040 Hb_002048_100--Hb_003119_040 Hb_002048_100--Hb_015037_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.102119 2.74699 4.02803 2.98764 0.0173185 0.0444049
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0326169 0.0192521 0 0.380877 0.386294

CAGE analysis