Hb_031266_020

Information

Type -
Description -
Location Contig31266: 18108-24352
Sequence    

Annotation

kegg
ID vvi:100260894
description CBL01; calcineurin B-like protein 01
nr
ID XP_012081016.1
description PREDICTED: calcineurin B-like protein 9 isoform X1 [Jatropha curcas]
swissprot
ID Q9LTB8
description Calcineurin B-like protein 9 OS=Arabidopsis thaliana GN=CBL9 PE=1 SV=3
trembl
ID A0A067K5Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17136 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calcineurin b-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33104: 17984-24458 , PASA_asmbl_33105: 21729-23325 , PASA_asmbl_33106: 19271-19389
cDNA
(Sanger)
(ID:Location)		 035_O16.ab1: 18092-24036

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031266_020 0.0 - - PREDICTED: calcineurin B-like protein 9 isoform X1 [Jatropha curcas]
2 Hb_004551_010 0.0847420686 - - tryptophan synthase beta chain, putative [Ricinus communis]
3 Hb_000592_070 0.1048715284 - - PREDICTED: probable calcium-binding protein CML27 [Jatropha curcas]
4 Hb_009252_090 0.1139351622 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
5 Hb_002048_100 0.1309533084 - - PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Jatropha curcas]
6 Hb_002133_010 0.1317514093 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
7 Hb_000134_260 0.1356890683 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_000256_180 0.1379304705 - - PREDICTED: uncharacterized protein LOC105637589 [Jatropha curcas]
9 Hb_000069_530 0.1383784778 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
10 Hb_004712_090 0.1416921181 - - Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis]
11 Hb_008878_010 0.1442710774 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 2-like [Populus euphratica]
12 Hb_002374_200 0.1464888356 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
13 Hb_012400_020 0.1477912089 - - Spotted leaf protein, putative [Ricinus communis]
14 Hb_001660_080 0.1485057503 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
15 Hb_000454_080 0.1496217869 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
16 Hb_004970_070 0.1499965493 - - hypothetical protein POPTR_0002s12620g [Populus trichocarpa]
17 Hb_003060_150 0.1503133753 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_005381_010 0.1604072532 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
19 Hb_160653_010 0.1617166815 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
20 Hb_001007_090 0.1635052629 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15 [Jatropha curcas]

Gene co-expression network

sample Hb_031266_020 Hb_031266_020 Hb_004551_010 Hb_004551_010 Hb_031266_020--Hb_004551_010 Hb_000592_070 Hb_000592_070 Hb_031266_020--Hb_000592_070 Hb_009252_090 Hb_009252_090 Hb_031266_020--Hb_009252_090 Hb_002048_100 Hb_002048_100 Hb_031266_020--Hb_002048_100 Hb_002133_010 Hb_002133_010 Hb_031266_020--Hb_002133_010 Hb_000134_260 Hb_000134_260 Hb_031266_020--Hb_000134_260 Hb_004551_010--Hb_000134_260 Hb_004551_010--Hb_009252_090 Hb_001660_080 Hb_001660_080 Hb_004551_010--Hb_001660_080 Hb_002374_200 Hb_002374_200 Hb_004551_010--Hb_002374_200 Hb_000035_140 Hb_000035_140 Hb_004551_010--Hb_000035_140 Hb_000592_070--Hb_002133_010 Hb_012400_020 Hb_012400_020 Hb_000592_070--Hb_012400_020 Hb_000592_070--Hb_009252_090 Hb_000069_530 Hb_000069_530 Hb_000592_070--Hb_000069_530 Hb_003060_150 Hb_003060_150 Hb_000592_070--Hb_003060_150 Hb_009252_090--Hb_012400_020 Hb_009252_090--Hb_000069_530 Hb_009252_090--Hb_003060_150 Hb_001430_010 Hb_001430_010 Hb_002048_100--Hb_001430_010 Hb_004970_070 Hb_004970_070 Hb_002048_100--Hb_004970_070 Hb_002048_100--Hb_002133_010 Hb_003119_040 Hb_003119_040 Hb_002048_100--Hb_003119_040 Hb_015037_010 Hb_015037_010 Hb_002048_100--Hb_015037_010 Hb_002133_010--Hb_012400_020 Hb_000997_130 Hb_000997_130 Hb_002133_010--Hb_000997_130 Hb_164577_010 Hb_164577_010 Hb_002133_010--Hb_164577_010 Hb_002133_010--Hb_000069_530 Hb_002133_010--Hb_009252_090 Hb_004712_090 Hb_004712_090 Hb_000134_260--Hb_004712_090 Hb_003688_220 Hb_003688_220 Hb_000134_260--Hb_003688_220 Hb_000134_260--Hb_002374_200 Hb_011918_030 Hb_011918_030 Hb_000134_260--Hb_011918_030 Hb_000134_260--Hb_000035_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0509473 30.007 54.8763 17.3446 0.0255678 0.0743
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.584677 0.64371 1.84686 2.07715 2.70385

CAGE analysis