Hb_015037_010

Information

Type -
Description -
Location Contig15037: 1763-14679
Sequence    

Annotation

kegg
ID rcu:RCOM_0906040
description ATP binding protein, putative (EC:2.7.11.25)
nr
ID XP_012091420.1
description PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
swissprot
ID Q9M0X5
description Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=3 SV=1
trembl
ID A0A067JAM0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21283 PE=3 SV=1
Gene Ontology
ID GO:0005622
description cysteine-rich receptor-like protein kinase 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12621: 1827-6874 , PASA_asmbl_12622: 7876-8615 , PASA_asmbl_12623: 8795-9701 , PASA_asmbl_12624: 10362-10590
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015037_010 0.0 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
2 Hb_001430_010 0.1091750412 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
3 Hb_002200_020 0.1202060555 transcription factor TF Family: C2C2-Dof hypothetical protein RCOM_0137680 [Ricinus communis]
4 Hb_070634_010 0.1225610376 - - TMV resistance protein N, putative [Ricinus communis]
5 Hb_000392_170 0.123878319 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
6 Hb_008806_040 0.1239710966 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
7 Hb_006873_010 0.1256883813 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_009907_020 0.1314346235 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
9 Hb_160653_010 0.1316127697 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
10 Hb_002540_100 0.1317433499 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
11 Hb_000996_040 0.1381152666 - - hypothetical protein POPTR_0003s12500g [Populus trichocarpa]
12 Hb_002048_100 0.1381441063 - - PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Jatropha curcas]
13 Hb_004316_020 0.1381450723 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
14 Hb_000395_120 0.1397290719 - - Stellacyanin, putative [Ricinus communis]
15 Hb_000193_060 0.1427594854 - - PREDICTED: F-box protein At4g35930 [Jatropha curcas]
16 Hb_008406_070 0.144600867 - - PREDICTED: probable protein phosphatase 2C 58 [Jatropha curcas]
17 Hb_008725_100 0.1447811427 - - PREDICTED: histone H1-like [Jatropha curcas]
18 Hb_002311_500 0.1448581147 - - PREDICTED: uncharacterized protein LOC105643461 [Jatropha curcas]
19 Hb_003747_250 0.1477499977 - - PREDICTED: potassium transporter 7 isoform X2 [Elaeis guineensis]
20 Hb_000862_050 0.1482749041 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]

Gene co-expression network

sample Hb_015037_010 Hb_015037_010 Hb_001430_010 Hb_001430_010 Hb_015037_010--Hb_001430_010 Hb_002200_020 Hb_002200_020 Hb_015037_010--Hb_002200_020 Hb_070634_010 Hb_070634_010 Hb_015037_010--Hb_070634_010 Hb_000392_170 Hb_000392_170 Hb_015037_010--Hb_000392_170 Hb_008806_040 Hb_008806_040 Hb_015037_010--Hb_008806_040 Hb_006873_010 Hb_006873_010 Hb_015037_010--Hb_006873_010 Hb_160653_010 Hb_160653_010 Hb_001430_010--Hb_160653_010 Hb_010721_010 Hb_010721_010 Hb_001430_010--Hb_010721_010 Hb_011915_020 Hb_011915_020 Hb_001430_010--Hb_011915_020 Hb_023386_060 Hb_023386_060 Hb_001430_010--Hb_023386_060 Hb_002048_100 Hb_002048_100 Hb_001430_010--Hb_002048_100 Hb_002200_020--Hb_000392_170 Hb_002311_500 Hb_002311_500 Hb_002200_020--Hb_002311_500 Hb_000200_270 Hb_000200_270 Hb_002200_020--Hb_000200_270 Hb_000856_230 Hb_000856_230 Hb_002200_020--Hb_000856_230 Hb_002540_100 Hb_002540_100 Hb_002200_020--Hb_002540_100 Hb_138086_010 Hb_138086_010 Hb_070634_010--Hb_138086_010 Hb_070634_010--Hb_008806_040 Hb_070634_010--Hb_160653_010 Hb_002676_110 Hb_002676_110 Hb_070634_010--Hb_002676_110 Hb_070634_010--Hb_001430_010 Hb_070634_010--Hb_010721_010 Hb_004316_020 Hb_004316_020 Hb_000392_170--Hb_004316_020 Hb_000392_170--Hb_002311_500 Hb_004223_080 Hb_004223_080 Hb_000392_170--Hb_004223_080 Hb_000392_170--Hb_000856_230 Hb_000392_170--Hb_000200_270 Hb_003747_250 Hb_003747_250 Hb_008806_040--Hb_003747_250 Hb_008806_040--Hb_138086_010 Hb_009476_070 Hb_009476_070 Hb_008806_040--Hb_009476_070 Hb_002774_180 Hb_002774_180 Hb_008806_040--Hb_002774_180 Hb_001989_040 Hb_001989_040 Hb_008806_040--Hb_001989_040 Hb_006873_010--Hb_004316_020 Hb_004314_020 Hb_004314_020 Hb_006873_010--Hb_004314_020 Hb_011028_040 Hb_011028_040 Hb_006873_010--Hb_011028_040 Hb_018563_010 Hb_018563_010 Hb_006873_010--Hb_018563_010 Hb_186995_010 Hb_186995_010 Hb_006873_010--Hb_186995_010 Hb_009252_090 Hb_009252_090 Hb_006873_010--Hb_009252_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.032014 1.38909 3.34411 2.32606 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0207178 0 0 0.37771 0.297153

CAGE analysis