Hb_004316_020

Information

Type -
Description -
Location Contig4316: 2506-3959
Sequence    

Annotation

kegg
ID rcu:RCOM_0497300
description hypothetical protein
nr
ID XP_012075169.1
description PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
swissprot
ID Q39008
description Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2
trembl
ID A0A067KTP3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09353 PE=4 SV=1
Gene Ontology
ID GO:0000166
description mitogen-activated protein kinase kinase kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42274: 2479-2665
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004316_020 0.0 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
2 Hb_006873_010 0.0898510798 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
3 Hb_000392_170 0.0962152882 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
4 Hb_003502_040 0.0962512763 - - PREDICTED: pathogen-related protein-like [Jatropha curcas]
5 Hb_003248_030 0.0980634263 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
6 Hb_003207_210 0.1011359186 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
7 Hb_164337_010 0.103802263 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
8 Hb_000856_230 0.1045702653 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
9 Hb_002540_100 0.1133773663 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
10 Hb_009421_090 0.1177335207 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
11 Hb_018563_010 0.1239389114 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
12 Hb_005694_170 0.1250816992 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
13 Hb_000809_130 0.1291123951 - - PREDICTED: peroxidase 10 isoform X3 [Jatropha curcas]
14 Hb_000395_120 0.1291132421 - - Stellacyanin, putative [Ricinus communis]
15 Hb_000438_200 0.1303610769 - - PREDICTED: protein NRT1/ PTR FAMILY 5.1 [Jatropha curcas]
16 Hb_000059_030 0.1306884286 - - PREDICTED: chaperone protein dnaJ 10 [Jatropha curcas]
17 Hb_000200_270 0.132464557 - - PREDICTED: lipid phosphate phosphatase 1-like isoform X1 [Jatropha curcas]
18 Hb_004223_080 0.134882339 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
19 Hb_002311_500 0.1358153208 - - PREDICTED: uncharacterized protein LOC105643461 [Jatropha curcas]
20 Hb_000371_030 0.1372915545 - - PREDICTED: LOW QUALITY PROTEIN: anthocyanidin 3-O-glucosyltransferase 5 [Prunus mume]

Gene co-expression network

sample Hb_004316_020 Hb_004316_020 Hb_006873_010 Hb_006873_010 Hb_004316_020--Hb_006873_010 Hb_000392_170 Hb_000392_170 Hb_004316_020--Hb_000392_170 Hb_003502_040 Hb_003502_040 Hb_004316_020--Hb_003502_040 Hb_003248_030 Hb_003248_030 Hb_004316_020--Hb_003248_030 Hb_003207_210 Hb_003207_210 Hb_004316_020--Hb_003207_210 Hb_164337_010 Hb_164337_010 Hb_004316_020--Hb_164337_010 Hb_004314_020 Hb_004314_020 Hb_006873_010--Hb_004314_020 Hb_011028_040 Hb_011028_040 Hb_006873_010--Hb_011028_040 Hb_018563_010 Hb_018563_010 Hb_006873_010--Hb_018563_010 Hb_186995_010 Hb_186995_010 Hb_006873_010--Hb_186995_010 Hb_009252_090 Hb_009252_090 Hb_006873_010--Hb_009252_090 Hb_002311_500 Hb_002311_500 Hb_000392_170--Hb_002311_500 Hb_002200_020 Hb_002200_020 Hb_000392_170--Hb_002200_020 Hb_004223_080 Hb_004223_080 Hb_000392_170--Hb_004223_080 Hb_000856_230 Hb_000856_230 Hb_000392_170--Hb_000856_230 Hb_000200_270 Hb_000200_270 Hb_000392_170--Hb_000200_270 Hb_003502_040--Hb_003248_030 Hb_003502_040--Hb_018563_010 Hb_029262_010 Hb_029262_010 Hb_003502_040--Hb_029262_010 Hb_000438_200 Hb_000438_200 Hb_003502_040--Hb_000438_200 Hb_005694_170 Hb_005694_170 Hb_003502_040--Hb_005694_170 Hb_003248_030--Hb_018563_010 Hb_003248_030--Hb_029262_010 Hb_003248_030--Hb_005694_170 Hb_000809_130 Hb_000809_130 Hb_003248_030--Hb_000809_130 Hb_003207_210--Hb_164337_010 Hb_003207_210--Hb_005694_170 Hb_003376_110 Hb_003376_110 Hb_003207_210--Hb_003376_110 Hb_009421_090 Hb_009421_090 Hb_003207_210--Hb_009421_090 Hb_000371_030 Hb_000371_030 Hb_003207_210--Hb_000371_030 Hb_164337_010--Hb_005694_170 Hb_164337_010--Hb_003376_110 Hb_164337_010--Hb_000371_030 Hb_164337_010--Hb_009421_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.32347 7.65777 4.24544 0 0.0378969
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.140163 0.793954

CAGE analysis