Hb_164337_010

Information

Type -
Description -
Location Contig164337: 373-2519
Sequence    

Annotation

kegg
ID rcu:RCOM_1310660
description wall-associated kinase, putative (EC:2.7.10.2)
nr
ID XP_012075777.1
description PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
swissprot
ID P0C5E2
description Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=2 SV=2
trembl
ID A0A067KT69
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09327 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable serine threonine-protein kinase at1g18390 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164337_010 0.0 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
2 Hb_003207_210 0.0443454978 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
3 Hb_005694_170 0.0788476324 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
4 Hb_003376_110 0.1031920305 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004316_020 0.103802263 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
6 Hb_000371_030 0.1191380158 - - PREDICTED: LOW QUALITY PROTEIN: anthocyanidin 3-O-glucosyltransferase 5 [Prunus mume]
7 Hb_009421_090 0.1216967305 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
8 Hb_003502_040 0.1269791785 - - PREDICTED: pathogen-related protein-like [Jatropha curcas]
9 Hb_001398_110 0.1296927156 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
10 Hb_002540_100 0.1313143692 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
11 Hb_003248_030 0.1338335373 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
12 Hb_001117_020 0.1348000545 - - hypothetical protein CICLE_v10008579mg [Citrus clementina]
13 Hb_000856_230 0.1377616272 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
14 Hb_000045_290 0.1377874536 - - -
15 Hb_019429_020 0.1388178766 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000170_260 0.139945091 - - amino acid transporter, putative [Ricinus communis]
17 Hb_000933_040 0.145714689 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
18 Hb_004241_140 0.1480150116 - - S-locus lectin protein kinase family protein, putative [Theobroma cacao]
19 Hb_000331_020 0.1490288187 - - cytochrome P450, putative [Ricinus communis]
20 Hb_000392_170 0.1500395462 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]

Gene co-expression network

sample Hb_164337_010 Hb_164337_010 Hb_003207_210 Hb_003207_210 Hb_164337_010--Hb_003207_210 Hb_005694_170 Hb_005694_170 Hb_164337_010--Hb_005694_170 Hb_003376_110 Hb_003376_110 Hb_164337_010--Hb_003376_110 Hb_004316_020 Hb_004316_020 Hb_164337_010--Hb_004316_020 Hb_000371_030 Hb_000371_030 Hb_164337_010--Hb_000371_030 Hb_009421_090 Hb_009421_090 Hb_164337_010--Hb_009421_090 Hb_003207_210--Hb_005694_170 Hb_003207_210--Hb_003376_110 Hb_003207_210--Hb_004316_020 Hb_003207_210--Hb_009421_090 Hb_003207_210--Hb_000371_030 Hb_005694_170--Hb_003376_110 Hb_007846_030 Hb_007846_030 Hb_005694_170--Hb_007846_030 Hb_000933_040 Hb_000933_040 Hb_005694_170--Hb_000933_040 Hb_003248_030 Hb_003248_030 Hb_005694_170--Hb_003248_030 Hb_003376_110--Hb_007846_030 Hb_000160_190 Hb_000160_190 Hb_003376_110--Hb_000160_190 Hb_000056_290 Hb_000056_290 Hb_003376_110--Hb_000056_290 Hb_006873_010 Hb_006873_010 Hb_004316_020--Hb_006873_010 Hb_000392_170 Hb_000392_170 Hb_004316_020--Hb_000392_170 Hb_003502_040 Hb_003502_040 Hb_004316_020--Hb_003502_040 Hb_004316_020--Hb_003248_030 Hb_008821_030 Hb_008821_030 Hb_000371_030--Hb_008821_030 Hb_001117_020 Hb_001117_020 Hb_000371_030--Hb_001117_020 Hb_004788_030 Hb_004788_030 Hb_000371_030--Hb_004788_030 Hb_019429_020 Hb_019429_020 Hb_000371_030--Hb_019429_020 Hb_002540_100 Hb_002540_100 Hb_000371_030--Hb_002540_100 Hb_003847_090 Hb_003847_090 Hb_000371_030--Hb_003847_090 Hb_014700_020 Hb_014700_020 Hb_009421_090--Hb_014700_020 Hb_000856_230 Hb_000856_230 Hb_009421_090--Hb_000856_230 Hb_000200_270 Hb_000200_270 Hb_009421_090--Hb_000200_270 Hb_115962_010 Hb_115962_010 Hb_009421_090--Hb_115962_010 Hb_003767_030 Hb_003767_030 Hb_009421_090--Hb_003767_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.485451 2.36168 1.24587 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.134816

CAGE analysis