Hb_000160_190

Information

Type -
Description -
Location Contig160: 164744-165907
Sequence    

Annotation

kegg
ID pop:POPTR_0005s14720g
description heavy-metal-associated domain-containing family protein
nr
ID XP_012089916.1
description PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
swissprot
ID Q9SZN7
description Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
trembl
ID A0A067JT09
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02501 PE=4 SV=1
Gene Ontology
ID GO:0046872
description heavy metal-associated isoprenylated plant protein 26

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000160_190 0.0 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
2 Hb_023640_020 0.0610525565 - - conserved hypothetical protein [Ricinus communis]
3 Hb_049846_010 0.0721674085 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
4 Hb_005977_080 0.0853374676 transcription factor TF Family: bZIP PREDICTED: transcription factor HY5-like [Jatropha curcas]
5 Hb_029262_010 0.0873593106 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Populus euphratica]
6 Hb_004137_110 0.0914032794 - - PREDICTED: probable auxin efflux carrier component 6 [Jatropha curcas]
7 Hb_004128_150 0.095706238 - - hypothetical protein POPTR_0016s08360g [Populus trichocarpa]
8 Hb_004007_050 0.0968491869 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT [Jatropha curcas]
9 Hb_000139_040 0.0995369279 - - spermine synthase, putative [Ricinus communis]
10 Hb_011310_170 0.1008443373 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
11 Hb_004308_030 0.1046244345 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
12 Hb_000031_240 0.1066331589 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
13 Hb_003376_110 0.1081938038 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001301_310 0.1085056215 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001958_040 0.1104228971 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]
16 Hb_001519_090 0.1126418508 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
17 Hb_003207_120 0.1218098701 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
18 Hb_129956_010 0.1247677263 - - PREDICTED: serine/threonine-protein kinase SAPK2 [Eucalyptus grandis]
19 Hb_000283_090 0.1268705543 - - Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis]
20 Hb_005357_140 0.1281917836 - - Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000160_190 Hb_000160_190 Hb_023640_020 Hb_023640_020 Hb_000160_190--Hb_023640_020 Hb_049846_010 Hb_049846_010 Hb_000160_190--Hb_049846_010 Hb_005977_080 Hb_005977_080 Hb_000160_190--Hb_005977_080 Hb_029262_010 Hb_029262_010 Hb_000160_190--Hb_029262_010 Hb_004137_110 Hb_004137_110 Hb_000160_190--Hb_004137_110 Hb_004128_150 Hb_004128_150 Hb_000160_190--Hb_004128_150 Hb_023640_020--Hb_004128_150 Hb_004007_050 Hb_004007_050 Hb_023640_020--Hb_004007_050 Hb_023640_020--Hb_004137_110 Hb_000139_040 Hb_000139_040 Hb_023640_020--Hb_000139_040 Hb_023640_020--Hb_005977_080 Hb_049846_010--Hb_000139_040 Hb_129956_010 Hb_129956_010 Hb_049846_010--Hb_129956_010 Hb_001958_040 Hb_001958_040 Hb_049846_010--Hb_001958_040 Hb_049846_010--Hb_004007_050 Hb_049846_010--Hb_023640_020 Hb_005977_080--Hb_004137_110 Hb_000031_240 Hb_000031_240 Hb_005977_080--Hb_000031_240 Hb_003207_120 Hb_003207_120 Hb_005977_080--Hb_003207_120 Hb_000331_170 Hb_000331_170 Hb_005977_080--Hb_000331_170 Hb_004308_030 Hb_004308_030 Hb_029262_010--Hb_004308_030 Hb_004202_030 Hb_004202_030 Hb_029262_010--Hb_004202_030 Hb_006501_080 Hb_006501_080 Hb_029262_010--Hb_006501_080 Hb_003502_040 Hb_003502_040 Hb_029262_010--Hb_003502_040 Hb_000049_030 Hb_000049_030 Hb_029262_010--Hb_000049_030 Hb_010449_010 Hb_010449_010 Hb_004137_110--Hb_010449_010 Hb_000103_220 Hb_000103_220 Hb_004137_110--Hb_000103_220 Hb_000441_130 Hb_000441_130 Hb_004137_110--Hb_000441_130 Hb_017434_010 Hb_017434_010 Hb_004137_110--Hb_017434_010 Hb_004128_150--Hb_004007_050 Hb_006614_020 Hb_006614_020 Hb_004128_150--Hb_006614_020 Hb_011310_170 Hb_011310_170 Hb_004128_150--Hb_011310_170 Hb_004128_150--Hb_001958_040 Hb_004453_160 Hb_004453_160 Hb_004128_150--Hb_004453_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.712028 6.70537 4.00344 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.65696

CAGE analysis