Hb_049846_010

Information

Type -
Description -
Location Contig49846: 80-543
Sequence    

Annotation

kegg
ID pop:POPTR_0007s00830g
description POPTRDRAFT_763717; hypothetical protein
nr
ID KDP42839.1
description hypothetical protein JCGZ_23781 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFG6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23781 PE=4 SV=1
Gene Ontology
ID GO:0005488
description probable receptor-like protein kinase at1g67000 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049846_010 0.0 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
2 Hb_000160_190 0.0721674085 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
3 Hb_000139_040 0.0741657052 - - spermine synthase, putative [Ricinus communis]
4 Hb_129956_010 0.0798438806 - - PREDICTED: serine/threonine-protein kinase SAPK2 [Eucalyptus grandis]
5 Hb_001958_040 0.0807137092 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]
6 Hb_004007_050 0.0813244867 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT [Jatropha curcas]
7 Hb_023640_020 0.0886419429 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000397_060 0.090214925 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]
9 Hb_001301_310 0.0954505365 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004308_030 0.0961699966 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
11 Hb_000031_240 0.0965977872 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
12 Hb_005357_140 0.0974913561 - - Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis]
13 Hb_004128_150 0.0986986559 - - hypothetical protein POPTR_0016s08360g [Populus trichocarpa]
14 Hb_011310_170 0.1007651912 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
15 Hb_006620_030 0.1027436905 - - nitrate reductase, putative [Ricinus communis]
16 Hb_000010_320 0.1041620894 - - PREDICTED: protein STICHEL-like 2 [Jatropha curcas]
17 Hb_001519_090 0.104507955 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
18 Hb_105148_020 0.1101016429 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
19 Hb_001258_130 0.1102121883 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
20 Hb_004453_160 0.1121521827 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_049846_010 Hb_049846_010 Hb_000160_190 Hb_000160_190 Hb_049846_010--Hb_000160_190 Hb_000139_040 Hb_000139_040 Hb_049846_010--Hb_000139_040 Hb_129956_010 Hb_129956_010 Hb_049846_010--Hb_129956_010 Hb_001958_040 Hb_001958_040 Hb_049846_010--Hb_001958_040 Hb_004007_050 Hb_004007_050 Hb_049846_010--Hb_004007_050 Hb_023640_020 Hb_023640_020 Hb_049846_010--Hb_023640_020 Hb_000160_190--Hb_023640_020 Hb_005977_080 Hb_005977_080 Hb_000160_190--Hb_005977_080 Hb_029262_010 Hb_029262_010 Hb_000160_190--Hb_029262_010 Hb_004137_110 Hb_004137_110 Hb_000160_190--Hb_004137_110 Hb_004128_150 Hb_004128_150 Hb_000160_190--Hb_004128_150 Hb_001258_130 Hb_001258_130 Hb_000139_040--Hb_001258_130 Hb_000139_040--Hb_129956_010 Hb_000139_040--Hb_023640_020 Hb_000031_240 Hb_000031_240 Hb_000139_040--Hb_000031_240 Hb_005357_140 Hb_005357_140 Hb_000139_040--Hb_005357_140 Hb_023827_030 Hb_023827_030 Hb_129956_010--Hb_023827_030 Hb_105148_020 Hb_105148_020 Hb_129956_010--Hb_105148_020 Hb_006620_030 Hb_006620_030 Hb_129956_010--Hb_006620_030 Hb_000312_100 Hb_000312_100 Hb_129956_010--Hb_000312_100 Hb_000073_040 Hb_000073_040 Hb_001958_040--Hb_000073_040 Hb_000397_060 Hb_000397_060 Hb_001958_040--Hb_000397_060 Hb_001958_040--Hb_004007_050 Hb_001301_310 Hb_001301_310 Hb_001958_040--Hb_001301_310 Hb_001958_040--Hb_004128_150 Hb_019516_010 Hb_019516_010 Hb_001958_040--Hb_019516_010 Hb_004007_050--Hb_004128_150 Hb_004453_160 Hb_004453_160 Hb_004007_050--Hb_004453_160 Hb_004007_050--Hb_023640_020 Hb_004007_050--Hb_000031_240 Hb_011310_170 Hb_011310_170 Hb_004007_050--Hb_011310_170 Hb_023640_020--Hb_004128_150 Hb_023640_020--Hb_004137_110 Hb_023640_020--Hb_005977_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.402493 7.03114 3.15693 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.80804

CAGE analysis