Hb_006501_080

Information

Type -
Description -
Location Contig6501: 57954-58574
Sequence    

Annotation

kegg
ID rcu:RCOM_1050200
description hypothetical protein
nr
ID XP_012076780.1
description PREDICTED: uncharacterized protein LOC105637775 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KC98
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07303 PE=4 SV=1
Gene Ontology
ID GO:0005773
description PREDICTED: uncharacterized protein LOC105637775

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52528: 57929-58926
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006501_080 0.0 - - PREDICTED: uncharacterized protein LOC105637775 [Jatropha curcas]
2 Hb_006620_030 0.0618777062 - - nitrate reductase, putative [Ricinus communis]
3 Hb_004308_030 0.0624810524 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
4 Hb_001680_020 0.0704496142 desease resistance Gene Name: RPW8 Disease resistance protein ADR1, putative [Ricinus communis]
5 Hb_004202_030 0.0759213031 - - PREDICTED: uncharacterized protein LOC103449702 [Malus domestica]
6 Hb_029262_010 0.0929314852 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Populus euphratica]
7 Hb_003207_120 0.0946532921 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
8 Hb_007007_100 0.1037275139 - - PREDICTED: subtilisin-like protease SBT1.1 [Jatropha curcas]
9 Hb_016297_010 0.1042174539 - - PREDICTED: uncharacterized protein LOC105638665 [Jatropha curcas]
10 Hb_000809_220 0.1049587535 - - PREDICTED: 3-ketodihydrosphingosine reductase [Jatropha curcas]
11 Hb_032731_010 0.1052936937 - - RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
12 Hb_023582_010 0.1068294875 - - conserved hypothetical protein [Ricinus communis]
13 Hb_129956_010 0.1080428152 - - PREDICTED: serine/threonine-protein kinase SAPK2 [Eucalyptus grandis]
14 Hb_001983_040 0.1082161707 - - PREDICTED: uncharacterized protein LOC105644022 [Jatropha curcas]
15 Hb_019973_010 0.1089491114 - - PREDICTED: probable methyltransferase PMT18 isoform X2 [Jatropha curcas]
16 Hb_007313_030 0.1092801006 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
17 Hb_001258_130 0.1095695651 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
18 Hb_000349_250 0.1100600398 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]
19 Hb_000890_170 0.111271108 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]
20 Hb_001519_090 0.1113014649 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]

Gene co-expression network

sample Hb_006501_080 Hb_006501_080 Hb_006620_030 Hb_006620_030 Hb_006501_080--Hb_006620_030 Hb_004308_030 Hb_004308_030 Hb_006501_080--Hb_004308_030 Hb_001680_020 Hb_001680_020 Hb_006501_080--Hb_001680_020 Hb_004202_030 Hb_004202_030 Hb_006501_080--Hb_004202_030 Hb_029262_010 Hb_029262_010 Hb_006501_080--Hb_029262_010 Hb_003207_120 Hb_003207_120 Hb_006501_080--Hb_003207_120 Hb_105148_020 Hb_105148_020 Hb_006620_030--Hb_105148_020 Hb_001369_590 Hb_001369_590 Hb_006620_030--Hb_001369_590 Hb_006620_030--Hb_004308_030 Hb_002499_050 Hb_002499_050 Hb_006620_030--Hb_002499_050 Hb_129956_010 Hb_129956_010 Hb_006620_030--Hb_129956_010 Hb_004308_030--Hb_029262_010 Hb_000809_220 Hb_000809_220 Hb_004308_030--Hb_000809_220 Hb_049846_010 Hb_049846_010 Hb_004308_030--Hb_049846_010 Hb_004308_030--Hb_004202_030 Hb_001680_020--Hb_006620_030 Hb_016297_010 Hb_016297_010 Hb_001680_020--Hb_016297_010 Hb_007007_100 Hb_007007_100 Hb_001680_020--Hb_007007_100 Hb_000890_170 Hb_000890_170 Hb_001680_020--Hb_000890_170 Hb_027684_010 Hb_027684_010 Hb_001680_020--Hb_027684_010 Hb_004202_030--Hb_003207_120 Hb_000086_470 Hb_000086_470 Hb_004202_030--Hb_000086_470 Hb_004202_030--Hb_029262_010 Hb_019973_010 Hb_019973_010 Hb_004202_030--Hb_019973_010 Hb_000160_190 Hb_000160_190 Hb_029262_010--Hb_000160_190 Hb_003502_040 Hb_003502_040 Hb_029262_010--Hb_003502_040 Hb_000049_030 Hb_000049_030 Hb_029262_010--Hb_000049_030 Hb_001519_090 Hb_001519_090 Hb_003207_120--Hb_001519_090 Hb_002518_040 Hb_002518_040 Hb_003207_120--Hb_002518_040 Hb_005977_080 Hb_005977_080 Hb_003207_120--Hb_005977_080 Hb_004137_110 Hb_004137_110 Hb_003207_120--Hb_004137_110 Hb_003207_120--Hb_000086_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 8.84916 68.8566 26.7792 0.0777473 0.119194
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.29672 23.483

CAGE analysis