Hb_007007_100

Information

Type -
Description -
Location Contig7007: 61264-63594
Sequence    

Annotation

kegg
ID rcu:RCOM_1613020
description Xylem serine proteinase 1 precursor, putative (EC:3.4.21.25)
nr
ID XP_012083506.1
description PREDICTED: subtilisin-like protease SBT1.1 [Jatropha curcas]
swissprot
ID Q84WS0
description Subtilisin-like protease SBT1.1 OS=Arabidopsis thaliana GN=SBTI1.1 PE=1 SV=1
trembl
ID B9RDI3
description Xylem serine proteinase 1, putative OS=Ricinus communis GN=RCOM_1613020 PE=3 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007007_100 0.0 - - PREDICTED: subtilisin-like protease SBT1.1 [Jatropha curcas]
2 Hb_005488_210 0.061636238 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
3 Hb_000007_330 0.0729585801 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
4 Hb_000890_170 0.0900239699 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]
5 Hb_000313_250 0.0920007483 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
6 Hb_000236_130 0.0943747469 - - PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
7 Hb_006620_030 0.1000667998 - - nitrate reductase, putative [Ricinus communis]
8 Hb_023827_030 0.1003457617 - - PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Populus euphratica]
9 Hb_001680_020 0.101611171 desease resistance Gene Name: RPW8 Disease resistance protein ADR1, putative [Ricinus communis]
10 Hb_000282_020 0.1024869594 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
11 Hb_004346_050 0.1029826581 - - PREDICTED: ABC transporter G family member 22 [Jatropha curcas]
12 Hb_006501_080 0.1037275139 - - PREDICTED: uncharacterized protein LOC105637775 [Jatropha curcas]
13 Hb_005890_010 0.1045387298 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
14 Hb_179129_010 0.1047336976 - - hypothetical protein POPTR_0018s10470g [Populus trichocarpa]
15 Hb_004411_010 0.1063049588 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
16 Hb_001519_090 0.1063595483 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
17 Hb_059429_010 0.1080396287 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
18 Hb_000005_060 0.1083845931 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
19 Hb_000069_440 0.1084628455 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
20 Hb_048141_050 0.1088781784 - - hypothetical protein PRUPE_ppa009153mg [Prunus persica]

Gene co-expression network

sample Hb_007007_100 Hb_007007_100 Hb_005488_210 Hb_005488_210 Hb_007007_100--Hb_005488_210 Hb_000007_330 Hb_000007_330 Hb_007007_100--Hb_000007_330 Hb_000890_170 Hb_000890_170 Hb_007007_100--Hb_000890_170 Hb_000313_250 Hb_000313_250 Hb_007007_100--Hb_000313_250 Hb_000236_130 Hb_000236_130 Hb_007007_100--Hb_000236_130 Hb_006620_030 Hb_006620_030 Hb_007007_100--Hb_006620_030 Hb_005488_210--Hb_000007_330 Hb_000413_050 Hb_000413_050 Hb_005488_210--Hb_000413_050 Hb_005890_010 Hb_005890_010 Hb_005488_210--Hb_005890_010 Hb_005488_210--Hb_000236_130 Hb_004346_050 Hb_004346_050 Hb_005488_210--Hb_004346_050 Hb_001926_070 Hb_001926_070 Hb_000007_330--Hb_001926_070 Hb_000007_330--Hb_000413_050 Hb_000007_330--Hb_000890_170 Hb_029695_090 Hb_029695_090 Hb_000007_330--Hb_029695_090 Hb_000890_170--Hb_000236_130 Hb_000890_170--Hb_000313_250 Hb_000890_170--Hb_001926_070 Hb_001606_010 Hb_001606_010 Hb_000890_170--Hb_001606_010 Hb_000294_020 Hb_000294_020 Hb_000890_170--Hb_000294_020 Hb_110266_010 Hb_110266_010 Hb_000313_250--Hb_110266_010 Hb_092516_010 Hb_092516_010 Hb_000313_250--Hb_092516_010 Hb_002007_120 Hb_002007_120 Hb_000313_250--Hb_002007_120 Hb_021443_060 Hb_021443_060 Hb_000313_250--Hb_021443_060 Hb_000005_060 Hb_000005_060 Hb_000313_250--Hb_000005_060 Hb_022167_010 Hb_022167_010 Hb_000236_130--Hb_022167_010 Hb_000692_060 Hb_000692_060 Hb_000236_130--Hb_000692_060 Hb_003777_090 Hb_003777_090 Hb_000236_130--Hb_003777_090 Hb_000236_130--Hb_000294_020 Hb_179129_010 Hb_179129_010 Hb_000236_130--Hb_179129_010 Hb_006501_080 Hb_006501_080 Hb_006620_030--Hb_006501_080 Hb_105148_020 Hb_105148_020 Hb_006620_030--Hb_105148_020 Hb_001369_590 Hb_001369_590 Hb_006620_030--Hb_001369_590 Hb_004308_030 Hb_004308_030 Hb_006620_030--Hb_004308_030 Hb_002499_050 Hb_002499_050 Hb_006620_030--Hb_002499_050 Hb_129956_010 Hb_129956_010 Hb_006620_030--Hb_129956_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.318738 2.15268 0.792782 0.00840798 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0150038 0 0.00596123 1.11439

CAGE analysis