Hb_001926_070

Information

Type -
Description -
Location Contig1926: 70701-73800
Sequence    

Annotation

kegg
ID pop:POPTR_0011s06040g
description GDSL-motif lipase/hydrolase family protein
nr
ID KDP21039.1
description hypothetical protein JCGZ_21510 [Jatropha curcas]
swissprot
ID Q9FJ40
description GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1
trembl
ID A0A067JNF1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21510 PE=4 SV=1
Gene Ontology
ID GO:0016635
description gdsl esterase lipase at5g45960

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001926_070 0.0 - - hypothetical protein JCGZ_21510 [Jatropha curcas]
2 Hb_001606_010 0.0404068422 - - kinase, putative [Ricinus communis]
3 Hb_000007_330 0.0688494767 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
4 Hb_032731_010 0.0732911987 - - RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
5 Hb_001677_170 0.0756981317 - - hypothetical protein M569_03661, partial [Genlisea aurea]
6 Hb_000890_170 0.0795325677 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]
7 Hb_010136_010 0.0849585016 - - Putative receptor-like protein kinase [Glycine soja]
8 Hb_000486_020 0.0882766849 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.2 [Jatropha curcas]
9 Hb_111997_010 0.0886001119 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
10 Hb_005890_010 0.089298236 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
11 Hb_000343_050 0.0936886474 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005488_210 0.0955948167 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
13 Hb_000236_130 0.0983177189 - - PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
14 Hb_003643_050 0.0987728119 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Fragaria vesca subsp. vesca]
15 Hb_000116_160 0.0999444913 transcription factor TF Family: RWP-RK hypothetical protein JCGZ_22391 [Jatropha curcas]
16 Hb_006618_110 0.1020480404 - - -
17 Hb_003873_020 0.1048146667 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
18 Hb_010534_040 0.1049211192 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
19 Hb_001352_030 0.1055327227 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
20 Hb_059318_010 0.1074824956 - - glutamate receptor 2 plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_001926_070 Hb_001926_070 Hb_001606_010 Hb_001606_010 Hb_001926_070--Hb_001606_010 Hb_000007_330 Hb_000007_330 Hb_001926_070--Hb_000007_330 Hb_032731_010 Hb_032731_010 Hb_001926_070--Hb_032731_010 Hb_001677_170 Hb_001677_170 Hb_001926_070--Hb_001677_170 Hb_000890_170 Hb_000890_170 Hb_001926_070--Hb_000890_170 Hb_010136_010 Hb_010136_010 Hb_001926_070--Hb_010136_010 Hb_001606_010--Hb_000890_170 Hb_001352_030 Hb_001352_030 Hb_001606_010--Hb_001352_030 Hb_000486_020 Hb_000486_020 Hb_001606_010--Hb_000486_020 Hb_001606_010--Hb_032731_010 Hb_003531_050 Hb_003531_050 Hb_001606_010--Hb_003531_050 Hb_005488_210 Hb_005488_210 Hb_000007_330--Hb_005488_210 Hb_007007_100 Hb_007007_100 Hb_000007_330--Hb_007007_100 Hb_000413_050 Hb_000413_050 Hb_000007_330--Hb_000413_050 Hb_000007_330--Hb_000890_170 Hb_029695_090 Hb_029695_090 Hb_000007_330--Hb_029695_090 Hb_059318_010 Hb_059318_010 Hb_032731_010--Hb_059318_010 Hb_074966_010 Hb_074966_010 Hb_032731_010--Hb_074966_010 Hb_001926_020 Hb_001926_020 Hb_032731_010--Hb_001926_020 Hb_003777_120 Hb_003777_120 Hb_032731_010--Hb_003777_120 Hb_111997_010 Hb_111997_010 Hb_001677_170--Hb_111997_010 Hb_000343_050 Hb_000343_050 Hb_001677_170--Hb_000343_050 Hb_000031_320 Hb_000031_320 Hb_001677_170--Hb_000031_320 Hb_006188_020 Hb_006188_020 Hb_001677_170--Hb_006188_020 Hb_001677_170--Hb_001606_010 Hb_000236_130 Hb_000236_130 Hb_000890_170--Hb_000236_130 Hb_000313_250 Hb_000313_250 Hb_000890_170--Hb_000313_250 Hb_000294_020 Hb_000294_020 Hb_000890_170--Hb_000294_020 Hb_003435_030 Hb_003435_030 Hb_010136_010--Hb_003435_030 Hb_000155_020 Hb_000155_020 Hb_010136_010--Hb_000155_020 Hb_011013_040 Hb_011013_040 Hb_010136_010--Hb_011013_040 Hb_001115_070 Hb_001115_070 Hb_010136_010--Hb_001115_070 Hb_004017_030 Hb_004017_030 Hb_010136_010--Hb_004017_030 Hb_012395_090 Hb_012395_090 Hb_010136_010--Hb_012395_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.196811 0.692171 0.320032 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.025414 0.459705

CAGE analysis