Hb_000236_130

Information

Type -
Description -
Location Contig236: 127451-128857
Sequence    

Annotation

kegg
ID tcc:TCM_020239
description HXXXD-type acyl-transferase family protein, putative
nr
ID XP_012071093.1
description PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
swissprot
ID Q9SVM9
description Protein ECERIFERUM 26 OS=Arabidopsis thaliana GN=CER26 PE=2 SV=1
trembl
ID A0A067L5G0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01091 PE=4 SV=1
Gene Ontology
ID GO:0016747
description protein eceriferum 26-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000236_130 0.0 - - PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
2 Hb_022167_010 0.0618959553 - - Kinase, putative isoform 2 [Theobroma cacao]
3 Hb_000692_060 0.0637901615 - - calcium-dependent protein kinase, putative [Ricinus communis]
4 Hb_000890_170 0.0649954325 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]
5 Hb_003777_090 0.0654140203 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
6 Hb_000294_020 0.0693610594 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
7 Hb_179129_010 0.0752038499 - - hypothetical protein POPTR_0018s10470g [Populus trichocarpa]
8 Hb_004346_050 0.0771671027 - - PREDICTED: ABC transporter G family member 22 [Jatropha curcas]
9 Hb_000928_100 0.0821099991 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
10 Hb_000282_020 0.0841980961 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
11 Hb_007254_010 0.0857744995 - - hypothetical protein JCGZ_25214 [Jatropha curcas]
12 Hb_005488_210 0.0873285585 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
13 Hb_092516_010 0.090933901 - - hypothetical protein JCGZ_12248 [Jatropha curcas]
14 Hb_000007_330 0.0911664645 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
15 Hb_006618_110 0.0919235831 - - -
16 Hb_000005_060 0.0941061904 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
17 Hb_033834_020 0.094215167 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000313_250 0.0942512334 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
19 Hb_007007_100 0.0943747469 - - PREDICTED: subtilisin-like protease SBT1.1 [Jatropha curcas]
20 Hb_078954_030 0.0956102743 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000236_130 Hb_000236_130 Hb_022167_010 Hb_022167_010 Hb_000236_130--Hb_022167_010 Hb_000692_060 Hb_000692_060 Hb_000236_130--Hb_000692_060 Hb_000890_170 Hb_000890_170 Hb_000236_130--Hb_000890_170 Hb_003777_090 Hb_003777_090 Hb_000236_130--Hb_003777_090 Hb_000294_020 Hb_000294_020 Hb_000236_130--Hb_000294_020 Hb_179129_010 Hb_179129_010 Hb_000236_130--Hb_179129_010 Hb_000928_100 Hb_000928_100 Hb_022167_010--Hb_000928_100 Hb_022167_010--Hb_179129_010 Hb_022167_010--Hb_000692_060 Hb_033834_020 Hb_033834_020 Hb_022167_010--Hb_033834_020 Hb_004346_050 Hb_004346_050 Hb_022167_010--Hb_004346_050 Hb_000188_070 Hb_000188_070 Hb_000692_060--Hb_000188_070 Hb_007254_010 Hb_007254_010 Hb_000692_060--Hb_007254_010 Hb_000692_060--Hb_033834_020 Hb_001958_030 Hb_001958_030 Hb_000692_060--Hb_001958_030 Hb_000313_250 Hb_000313_250 Hb_000890_170--Hb_000313_250 Hb_000007_330 Hb_000007_330 Hb_000890_170--Hb_000007_330 Hb_001926_070 Hb_001926_070 Hb_000890_170--Hb_001926_070 Hb_001606_010 Hb_001606_010 Hb_000890_170--Hb_001606_010 Hb_000890_170--Hb_000294_020 Hb_003777_090--Hb_000294_020 Hb_063405_010 Hb_063405_010 Hb_003777_090--Hb_063405_010 Hb_000483_470 Hb_000483_470 Hb_003777_090--Hb_000483_470 Hb_003937_010 Hb_003937_010 Hb_003777_090--Hb_003937_010 Hb_003777_090--Hb_022167_010 Hb_000294_020--Hb_000483_470 Hb_092516_010 Hb_092516_010 Hb_000294_020--Hb_092516_010 Hb_000294_020--Hb_000928_100 Hb_000294_020--Hb_022167_010 Hb_179129_010--Hb_004346_050 Hb_016371_010 Hb_016371_010 Hb_179129_010--Hb_016371_010 Hb_078954_030 Hb_078954_030 Hb_179129_010--Hb_078954_030 Hb_001424_010 Hb_001424_010 Hb_179129_010--Hb_001424_010 Hb_000025_700 Hb_000025_700 Hb_179129_010--Hb_000025_700 Hb_000530_040 Hb_000530_040 Hb_179129_010--Hb_000530_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.376744 2.57487 0.722478 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0634197 1.49023

CAGE analysis