Hb_000483_470

Information

Type -
Description -
Location Contig483: 408041-410068
Sequence    

Annotation

kegg
ID rcu:RCOM_0192390
description monoxygenase, putative (EC:1.14.13.90)
nr
ID XP_012070074.1
description PREDICTED: zeaxanthin epoxidase, chloroplastic-like isoform X1 [Jatropha curcas]
swissprot
ID A6T923
description FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1
trembl
ID A0A067L748
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03465 PE=4 SV=1
Gene Ontology
ID GO:0009540
description zeaxanthin chloroplastic-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44844: 408049-408258 , PASA_asmbl_44845: 408802-409265
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000483_470 0.0 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like isoform X1 [Jatropha curcas]
2 Hb_000294_020 0.067766999 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
3 Hb_003777_090 0.0707698786 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
4 Hb_004109_140 0.0813654751 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000928_100 0.088063754 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
6 Hb_060534_010 0.0899519319 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
7 Hb_000025_700 0.0906076616 - - PREDICTED: serine--glyoxylate aminotransferase [Nelumbo nucifera]
8 Hb_078954_030 0.0956184613 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000386_010 0.0963287274 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002010_030 0.0967017166 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
11 Hb_005227_030 0.0987886936 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Jatropha curcas]
12 Hb_005305_140 0.099223954 - - unknown [Populus trichocarpa]
13 Hb_001864_050 0.1009288593 - - chloroplast oxygen-evolving enhancer protein [Manihot esculenta]
14 Hb_003767_060 0.1013590643 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
15 Hb_063405_010 0.1016131666 - - PREDICTED: probable terpene synthase 3 [Jatropha curcas]
16 Hb_179129_010 0.1023262668 - - hypothetical protein POPTR_0018s10470g [Populus trichocarpa]
17 Hb_006106_010 0.1027345783 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
18 Hb_004346_050 0.1039502849 - - PREDICTED: ABC transporter G family member 22 [Jatropha curcas]
19 Hb_000359_050 0.1047776505 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]
20 Hb_022167_010 0.1051114197 - - Kinase, putative isoform 2 [Theobroma cacao]

Gene co-expression network

sample Hb_000483_470 Hb_000483_470 Hb_000294_020 Hb_000294_020 Hb_000483_470--Hb_000294_020 Hb_003777_090 Hb_003777_090 Hb_000483_470--Hb_003777_090 Hb_004109_140 Hb_004109_140 Hb_000483_470--Hb_004109_140 Hb_000928_100 Hb_000928_100 Hb_000483_470--Hb_000928_100 Hb_060534_010 Hb_060534_010 Hb_000483_470--Hb_060534_010 Hb_000025_700 Hb_000025_700 Hb_000483_470--Hb_000025_700 Hb_000294_020--Hb_003777_090 Hb_000236_130 Hb_000236_130 Hb_000294_020--Hb_000236_130 Hb_092516_010 Hb_092516_010 Hb_000294_020--Hb_092516_010 Hb_000294_020--Hb_000928_100 Hb_022167_010 Hb_022167_010 Hb_000294_020--Hb_022167_010 Hb_003777_090--Hb_000236_130 Hb_063405_010 Hb_063405_010 Hb_003777_090--Hb_063405_010 Hb_003937_010 Hb_003937_010 Hb_003777_090--Hb_003937_010 Hb_003777_090--Hb_022167_010 Hb_005305_140 Hb_005305_140 Hb_004109_140--Hb_005305_140 Hb_000834_170 Hb_000834_170 Hb_004109_140--Hb_000834_170 Hb_005227_030 Hb_005227_030 Hb_004109_140--Hb_005227_030 Hb_000386_010 Hb_000386_010 Hb_004109_140--Hb_000386_010 Hb_001864_050 Hb_001864_050 Hb_004109_140--Hb_001864_050 Hb_000928_100--Hb_022167_010 Hb_000928_100--Hb_000386_010 Hb_000749_140 Hb_000749_140 Hb_000928_100--Hb_000749_140 Hb_033834_020 Hb_033834_020 Hb_000928_100--Hb_033834_020 Hb_001916_110 Hb_001916_110 Hb_000928_100--Hb_001916_110 Hb_012833_010 Hb_012833_010 Hb_060534_010--Hb_012833_010 Hb_000343_050 Hb_000343_050 Hb_060534_010--Hb_000343_050 Hb_003767_060 Hb_003767_060 Hb_060534_010--Hb_003767_060 Hb_003373_050 Hb_003373_050 Hb_060534_010--Hb_003373_050 Hb_004017_030 Hb_004017_030 Hb_060534_010--Hb_004017_030 Hb_078954_030 Hb_078954_030 Hb_000025_700--Hb_078954_030 Hb_001424_010 Hb_001424_010 Hb_000025_700--Hb_001424_010 Hb_179129_010 Hb_179129_010 Hb_000025_700--Hb_179129_010 Hb_004346_050 Hb_004346_050 Hb_000025_700--Hb_004346_050 Hb_001369_340 Hb_001369_340 Hb_000025_700--Hb_001369_340 Hb_016371_010 Hb_016371_010 Hb_000025_700--Hb_016371_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0131384 4.10215 20.5954 4.12779 0.063237 0.0460704
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0299201 0.0470788 0.132863 0.460173 16.5225

CAGE analysis