Hb_012833_010

Information

Type -
Description -
Location Contig12833: 10972-14063
Sequence    

Annotation

kegg
ID egr:104443657
description uncharacterized LOC104443657
nr
ID XP_012070035.1
description PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L719
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03435 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08697: 11032-13180 , PASA_asmbl_08698: 11032-13180
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012833_010 0.0 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
2 Hb_060534_010 0.0967411716 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
3 Hb_004117_370 0.1079323991 - - PREDICTED: U-box domain-containing protein 16 [Jatropha curcas]
4 Hb_014720_140 0.1109399868 - - PREDICTED: uncharacterized protein LOC105640367 [Jatropha curcas]
5 Hb_015934_060 0.1111060606 - - PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
6 Hb_000982_100 0.1192601821 transcription factor TF Family: bHLH PREDICTED: transcription factor PIF1-like isoform X1 [Jatropha curcas]
7 Hb_000313_250 0.1334133241 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
8 Hb_000343_050 0.134735142 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000645_260 0.1350021055 - - PREDICTED: uncharacterized protein LOC105643508 [Jatropha curcas]
10 Hb_101133_040 0.1365767256 - - PREDICTED: nudix hydrolase 18, mitochondrial-like [Jatropha curcas]
11 Hb_000127_100 0.1381966392 - - PREDICTED: myb-related transcription factor, partner of profilin-like [Populus euphratica]
12 Hb_002027_100 0.140322732 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000413_190 0.1403474514 - - PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Pyrus x bretschneideri]
14 Hb_000732_300 0.1412664 - - PREDICTED: uncharacterized protein LOC105649465 isoform X2 [Jatropha curcas]
15 Hb_010534_040 0.1414098812 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
16 Hb_000302_360 0.1446352294 - - beta-carotene hydroxylase, putative [Ricinus communis]
17 Hb_010584_020 0.1454158273 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
18 Hb_000413_050 0.1457730356 - - PREDICTED: transcription factor bHLH112 isoform X2 [Jatropha curcas]
19 Hb_003373_050 0.14732075 - - receptor protein kinase zmpk1, putative [Ricinus communis]
20 Hb_000890_170 0.1473958186 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_012833_010 Hb_012833_010 Hb_060534_010 Hb_060534_010 Hb_012833_010--Hb_060534_010 Hb_004117_370 Hb_004117_370 Hb_012833_010--Hb_004117_370 Hb_014720_140 Hb_014720_140 Hb_012833_010--Hb_014720_140 Hb_015934_060 Hb_015934_060 Hb_012833_010--Hb_015934_060 Hb_000982_100 Hb_000982_100 Hb_012833_010--Hb_000982_100 Hb_000313_250 Hb_000313_250 Hb_012833_010--Hb_000313_250 Hb_000483_470 Hb_000483_470 Hb_060534_010--Hb_000483_470 Hb_000343_050 Hb_000343_050 Hb_060534_010--Hb_000343_050 Hb_003767_060 Hb_003767_060 Hb_060534_010--Hb_003767_060 Hb_003373_050 Hb_003373_050 Hb_060534_010--Hb_003373_050 Hb_004017_030 Hb_004017_030 Hb_060534_010--Hb_004017_030 Hb_000107_090 Hb_000107_090 Hb_004117_370--Hb_000107_090 Hb_004531_170 Hb_004531_170 Hb_004117_370--Hb_004531_170 Hb_004117_370--Hb_000982_100 Hb_000127_100 Hb_000127_100 Hb_004117_370--Hb_000127_100 Hb_000167_100 Hb_000167_100 Hb_004117_370--Hb_000167_100 Hb_000645_260 Hb_000645_260 Hb_014720_140--Hb_000645_260 Hb_000302_360 Hb_000302_360 Hb_014720_140--Hb_000302_360 Hb_010534_040 Hb_010534_040 Hb_014720_140--Hb_010534_040 Hb_014720_140--Hb_000313_250 Hb_033006_020 Hb_033006_020 Hb_014720_140--Hb_033006_020 Hb_015934_060--Hb_000302_360 Hb_000049_280 Hb_000049_280 Hb_015934_060--Hb_000049_280 Hb_003531_050 Hb_003531_050 Hb_015934_060--Hb_003531_050 Hb_015934_060--Hb_000645_260 Hb_015934_060--Hb_010534_040 Hb_000982_100--Hb_000645_260 Hb_000982_100--Hb_004531_170 Hb_002244_020 Hb_002244_020 Hb_000982_100--Hb_002244_020 Hb_000982_100--Hb_000127_100 Hb_000486_020 Hb_000486_020 Hb_000982_100--Hb_000486_020 Hb_000890_170 Hb_000890_170 Hb_000313_250--Hb_000890_170 Hb_110266_010 Hb_110266_010 Hb_000313_250--Hb_110266_010 Hb_092516_010 Hb_092516_010 Hb_000313_250--Hb_092516_010 Hb_002007_120 Hb_002007_120 Hb_000313_250--Hb_002007_120 Hb_021443_060 Hb_021443_060 Hb_000313_250--Hb_021443_060 Hb_000005_060 Hb_000005_060 Hb_000313_250--Hb_000005_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.331726 4.45651 14.8163 6.35173 0.43733 0.112963
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0434568 0.12539 0.523346 0.162761 11.1393

CAGE analysis