Hb_000371_030

Information

Type -
Description -
Location Contig371: 73548-74768
Sequence    

Annotation

kegg
ID pmum:103340043
description anthocyanidin 3-O-glucosyltransferase 5
nr
ID XP_008241631.1
description PREDICTED: LOW QUALITY PROTEIN: anthocyanidin 3-O-glucosyltransferase 5 [Prunus mume]
swissprot
ID Q40287
description Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5 PE=2 SV=1
trembl
ID A0A078GVS7
description BnaA06g25150D protein OS=Brassica napus GN=BnaA06g25150D PE=3 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucosyltransferase 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000371_030 0.0 - - PREDICTED: LOW QUALITY PROTEIN: anthocyanidin 3-O-glucosyltransferase 5 [Prunus mume]
2 Hb_008821_030 0.079933917 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
3 Hb_001117_020 0.084030635 - - hypothetical protein CICLE_v10008579mg [Citrus clementina]
4 Hb_004788_030 0.084734382 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
5 Hb_019429_020 0.0849927009 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_002540_100 0.09112003 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
7 Hb_003847_090 0.0924153224 - - PREDICTED: tyrosine decarboxylase 1-like [Jatropha curcas]
8 Hb_001410_040 0.0929412843 - - Protein ABIL2, putative [Ricinus communis]
9 Hb_009385_010 0.0946399312 - - Cysteine/Histidine-rich C1 domain family protein, putative [Theobroma cacao]
10 Hb_007747_070 0.0968002221 - - PREDICTED: casparian strip membrane protein 1-like [Jatropha curcas]
11 Hb_000045_290 0.097425542 - - -
12 Hb_006083_010 0.1023886447 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
13 Hb_055877_010 0.1040128777 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
14 Hb_000856_230 0.1066276811 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
15 Hb_001398_110 0.1069286914 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
16 Hb_004241_140 0.1078061763 - - S-locus lectin protein kinase family protein, putative [Theobroma cacao]
17 Hb_021142_030 0.109602039 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
18 Hb_012146_010 0.1120886016 - - PREDICTED: uncharacterized protein LOC105111251 [Populus euphratica]
19 Hb_007894_040 0.115449884 - - PREDICTED: NEP1-interacting protein 1 isoform X1 [Jatropha curcas]
20 Hb_164337_010 0.1191380158 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]

Gene co-expression network

sample Hb_000371_030 Hb_000371_030 Hb_008821_030 Hb_008821_030 Hb_000371_030--Hb_008821_030 Hb_001117_020 Hb_001117_020 Hb_000371_030--Hb_001117_020 Hb_004788_030 Hb_004788_030 Hb_000371_030--Hb_004788_030 Hb_019429_020 Hb_019429_020 Hb_000371_030--Hb_019429_020 Hb_002540_100 Hb_002540_100 Hb_000371_030--Hb_002540_100 Hb_003847_090 Hb_003847_090 Hb_000371_030--Hb_003847_090 Hb_008821_030--Hb_004788_030 Hb_001410_040 Hb_001410_040 Hb_008821_030--Hb_001410_040 Hb_009385_010 Hb_009385_010 Hb_008821_030--Hb_009385_010 Hb_007747_070 Hb_007747_070 Hb_008821_030--Hb_007747_070 Hb_008821_030--Hb_019429_020 Hb_008821_030--Hb_001117_020 Hb_001117_020--Hb_019429_020 Hb_000045_290 Hb_000045_290 Hb_001117_020--Hb_000045_290 Hb_001398_110 Hb_001398_110 Hb_001117_020--Hb_001398_110 Hb_001117_020--Hb_004788_030 Hb_004241_140 Hb_004241_140 Hb_001117_020--Hb_004241_140 Hb_004788_030--Hb_001410_040 Hb_004788_030--Hb_009385_010 Hb_006083_010 Hb_006083_010 Hb_004788_030--Hb_006083_010 Hb_004788_030--Hb_019429_020 Hb_004788_030--Hb_007747_070 Hb_019429_020--Hb_001398_110 Hb_019429_020--Hb_000045_290 Hb_019429_020--Hb_006083_010 Hb_000856_230 Hb_000856_230 Hb_002540_100--Hb_000856_230 Hb_004316_020 Hb_004316_020 Hb_002540_100--Hb_004316_020 Hb_002540_100--Hb_003847_090 Hb_005599_010 Hb_005599_010 Hb_002540_100--Hb_005599_010 Hb_006873_010 Hb_006873_010 Hb_002540_100--Hb_006873_010 Hb_003847_090--Hb_006083_010 Hb_000277_030 Hb_000277_030 Hb_003847_090--Hb_000277_030 Hb_003847_090--Hb_004788_030 Hb_003847_090--Hb_001410_040 Hb_003847_090--Hb_009385_010 Hb_001002_020 Hb_001002_020 Hb_003847_090--Hb_001002_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0216905 9.0747 30.2669 12.8757 0.0337502 0.0640515
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.125181 0.388528

CAGE analysis