Hb_032071_010

Information

Type -
Description -
Location Contig32071: 149-295
Sequence    

Annotation

kegg
ID egr:104424176
description proline-rich receptor-like protein kinase PERK1
nr
ID KCW53713.1
description hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A0A9Q8A3
description Uncharacterized protein OS=Arundo donax PE=4 SV=1
Gene Ontology
ID GO:0004672
description proline-rich receptor-like protein kinase perk15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032071_010 0.0 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
2 Hb_002289_180 0.0795682756 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
3 Hb_112703_010 0.0799680228 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
4 Hb_008651_010 0.0864719292 - - cytochrome P450, putative [Ricinus communis]
5 Hb_179363_010 0.0890896502 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
6 Hb_001846_030 0.0973031128 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
7 Hb_000997_130 0.103341391 - - DNA binding protein, putative [Ricinus communis]
8 Hb_010223_010 0.110721188 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
9 Hb_000164_160 0.1124517861 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
10 Hb_012022_020 0.1154082056 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
11 Hb_000192_030 0.1260853827 - - PREDICTED: TATA-box-binding protein 2 isoform X1 [Setaria italica]
12 Hb_030903_020 0.1287952457 - - PREDICTED: putative 12-oxophytodienoate reductase 11 [Jatropha curcas]
13 Hb_004899_010 0.1354017372 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
14 Hb_000433_050 0.1355806099 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
15 Hb_167186_010 0.1358361492 - - cation-transporting atpase plant, putative [Ricinus communis]
16 Hb_074672_010 0.1359671854 - - receptor serine/threonine kinase, putative [Ricinus communis]
17 Hb_000819_020 0.1365067846 - - hypothetical protein PRUPE_ppa020290mg, partial [Prunus persica]
18 Hb_010994_020 0.1389514405 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
19 Hb_005054_330 0.1405058706 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
20 Hb_000025_490 0.1421029627 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]

Gene co-expression network

sample Hb_032071_010 Hb_032071_010 Hb_002289_180 Hb_002289_180 Hb_032071_010--Hb_002289_180 Hb_112703_010 Hb_112703_010 Hb_032071_010--Hb_112703_010 Hb_008651_010 Hb_008651_010 Hb_032071_010--Hb_008651_010 Hb_179363_010 Hb_179363_010 Hb_032071_010--Hb_179363_010 Hb_001846_030 Hb_001846_030 Hb_032071_010--Hb_001846_030 Hb_000997_130 Hb_000997_130 Hb_032071_010--Hb_000997_130 Hb_002289_180--Hb_112703_010 Hb_002289_180--Hb_000997_130 Hb_002289_180--Hb_008651_010 Hb_099188_010 Hb_099188_010 Hb_002289_180--Hb_099188_010 Hb_008637_020 Hb_008637_020 Hb_002289_180--Hb_008637_020 Hb_112703_010--Hb_179363_010 Hb_112703_010--Hb_008651_010 Hb_112703_010--Hb_000997_130 Hb_000164_160 Hb_000164_160 Hb_112703_010--Hb_000164_160 Hb_008651_010--Hb_179363_010 Hb_010223_010 Hb_010223_010 Hb_008651_010--Hb_010223_010 Hb_000433_050 Hb_000433_050 Hb_008651_010--Hb_000433_050 Hb_179363_010--Hb_000433_050 Hb_179363_010--Hb_002289_180 Hb_001515_040 Hb_001515_040 Hb_179363_010--Hb_001515_040 Hb_008948_070 Hb_008948_070 Hb_001846_030--Hb_008948_070 Hb_006478_140 Hb_006478_140 Hb_001846_030--Hb_006478_140 Hb_012022_020 Hb_012022_020 Hb_001846_030--Hb_012022_020 Hb_017693_040 Hb_017693_040 Hb_001846_030--Hb_017693_040 Hb_000192_030 Hb_000192_030 Hb_001846_030--Hb_000192_030 Hb_046610_010 Hb_046610_010 Hb_000997_130--Hb_046610_010 Hb_164577_010 Hb_164577_010 Hb_000997_130--Hb_164577_010 Hb_007546_010 Hb_007546_010 Hb_000997_130--Hb_007546_010 Hb_000997_130--Hb_000164_160 Hb_000997_130--Hb_010223_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 996.576 1040.93 237.224 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 20.0842 0

CAGE analysis